Gene : Medtr3g101480 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF14295 - PAN domain (PAN_4) Description:  plant/F17M5-140 protein
Genomic Order:  5554 Name:  ? Medtr3g101480
Secondary Identifier:  ? PAC:31054288
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g101480 0.5kb upstream 0.5kb upstream 3393 true chr3: 46705831-46709223 Medicago truncatula
Medtr3g101480 0.5kb upstream 0.5kb upstream 500 false chr3: 46708724-46709223 Medicago truncatula
Medtr3g101480 0.5kb downstream 0.5kb downstream 3393 true chr3: 46705331-46708723 Medicago truncatula
Medtr3g101480 0.5kb downstream 0.5kb downstream 500 false chr3: 46705331-46705830 Medicago truncatula
Medtr3g101480 1.0kb upstream 1.0kb upstream 3893 true chr3: 46705831-46709723 Medicago truncatula
Medtr3g101480 1.0kb upstream 1.0kb upstream 1000 false chr3: 46708724-46709723 Medicago truncatula
Medtr3g101480 1.0kb downstream 1.0kb downstream 3893 true chr3: 46704831-46708723 Medicago truncatula
Medtr3g101480 1.0kb downstream 1.0kb downstream 1000 false chr3: 46704831-46705830 Medicago truncatula
Medtr3g101480 2.0kb upstream 2.0kb upstream 4893 true chr3: 46705831-46710723 Medicago truncatula
Medtr3g101480 2.0kb upstream 2.0kb upstream 2000 false chr3: 46708724-46710723 Medicago truncatula
Medtr3g101480 2.0kb downstream 2.0kb downstream 4893 true chr3: 46703831-46708723 Medicago truncatula
Medtr3g101480 2.0kb downstream 2.0kb downstream 2000 false chr3: 46703831-46705830 Medicago truncatula
Medtr3g101480 5.0kb upstream 5.0kb upstream 7893 true chr3: 46705831-46713723 Medicago truncatula
Medtr3g101480 5.0kb upstream 5.0kb upstream 5000 false chr3: 46708724-46713723 Medicago truncatula
Medtr3g101480 5.0kb downstream 5.0kb downstream 7893 true chr3: 46700831-46708723 Medicago truncatula
Medtr3g101480 5.0kb downstream 5.0kb downstream 5000 false chr3: 46700831-46705830 Medicago truncatula
Medtr3g101480 10.0kb upstream 10.0kb upstream 12893 true chr3: 46705831-46718723 Medicago truncatula
Medtr3g101480 10.0kb upstream 10.0kb upstream 10000 false chr3: 46708724-46718723 Medicago truncatula
Medtr3g101480 10.0kb downstream 10.0kb downstream 12893 true chr3: 46695831-46708723 Medicago truncatula
Medtr3g101480 10.0kb downstream 10.0kb downstream 10000 false chr3: 46695831-46705830 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311658 5265 Fabidae View MSA
124069098 5270 Rosid View MSA
123737293 5271 Pentapetalae View MSA
122785804 5272 Eudicot View MSA
122047056 5273 Angiosperm View MSA
123428953 5275 Viridiplantae View MSA
121348504 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.857       High
cufflinks 0.545        
cufflinks 1.726        
cufflinks 0.468        
cufflinks 1.269        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.304       Low
cufflinks 0.946        
cufflinks 0.51        

0 Strain