Gene : Medtr3g101960 M. truncatula Mt4.0v1
Defline:  (1 of 166) PF02458 - Transferase family (Transferase) Description:  HXXXD-type acyl-transferase family protein
Genomic Order:  5592 Name:  ? Medtr3g101960
Secondary Identifier:  ? PAC:31056507
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-361 Medicago truncatula pathologic  
Mtruncatula PWY-6040 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g101960 0.5kb upstream 0.5kb upstream 2135 true chr3: 46973917-46976051 Medicago truncatula
Medtr3g101960 0.5kb upstream 0.5kb upstream 500 false chr3: 46975552-46976051 Medicago truncatula
Medtr3g101960 0.5kb downstream 0.5kb downstream 2135 true chr3: 46973417-46975551 Medicago truncatula
Medtr3g101960 0.5kb downstream 0.5kb downstream 500 false chr3: 46973417-46973916 Medicago truncatula
Medtr3g101960 1.0kb upstream 1.0kb upstream 2635 true chr3: 46973917-46976551 Medicago truncatula
Medtr3g101960 1.0kb upstream 1.0kb upstream 1000 false chr3: 46975552-46976551 Medicago truncatula
Medtr3g101960 1.0kb downstream 1.0kb downstream 2635 true chr3: 46972917-46975551 Medicago truncatula
Medtr3g101960 1.0kb downstream 1.0kb downstream 1000 false chr3: 46972917-46973916 Medicago truncatula
Medtr3g101960 2.0kb upstream 2.0kb upstream 3635 true chr3: 46973917-46977551 Medicago truncatula
Medtr3g101960 2.0kb upstream 2.0kb upstream 2000 false chr3: 46975552-46977551 Medicago truncatula
Medtr3g101960 2.0kb downstream 2.0kb downstream 3635 true chr3: 46971917-46975551 Medicago truncatula
Medtr3g101960 2.0kb downstream 2.0kb downstream 2000 false chr3: 46971917-46973916 Medicago truncatula
Medtr3g101960 5.0kb upstream 5.0kb upstream 6635 true chr3: 46973917-46980551 Medicago truncatula
Medtr3g101960 5.0kb upstream 5.0kb upstream 5000 false chr3: 46975552-46980551 Medicago truncatula
Medtr3g101960 5.0kb downstream 5.0kb downstream 6635 true chr3: 46968917-46975551 Medicago truncatula
Medtr3g101960 5.0kb downstream 5.0kb downstream 5000 false chr3: 46968917-46973916 Medicago truncatula
Medtr3g101960 10.0kb upstream 10.0kb upstream 11635 true chr3: 46973917-46985551 Medicago truncatula
Medtr3g101960 10.0kb upstream 10.0kb upstream 10000 false chr3: 46975552-46985551 Medicago truncatula
Medtr3g101960 10.0kb downstream 10.0kb downstream 11635 true chr3: 46963917-46975551 Medicago truncatula
Medtr3g101960 10.0kb downstream 10.0kb downstream 10000 false chr3: 46963917-46973916 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300600 5265 Fabidae View MSA
124068484 5270 Rosid View MSA
123747860 5271 Pentapetalae View MSA
122791254 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.375        
cufflinks 1.353        
cufflinks 13.403     High High
cufflinks 0.356       Low
cufflinks 0.197       Low
cufflinks 4.409        
cufflinks 1.879        
cufflinks 6.948        
cufflinks 1.972        

0 Strain