Gene : Medtr3g102010 M. truncatula Mt4.0v1
Defline:  (1 of 166) PF02458 - Transferase family (Transferase) Description:  HXXXD-type acyl-transferase family protein
Genomic Order:  5595 Name:  ? Medtr3g102010
Secondary Identifier:  ? PAC:31056692
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-361 Medicago truncatula pathologic  
Mtruncatula PWY-6040 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g102010 0.5kb upstream 0.5kb upstream 2294 true chr3: 46994653-46996946 Medicago truncatula
Medtr3g102010 0.5kb upstream 0.5kb upstream 500 false chr3: 46996447-46996946 Medicago truncatula
Medtr3g102010 0.5kb downstream 0.5kb downstream 2294 true chr3: 46994153-46996446 Medicago truncatula
Medtr3g102010 0.5kb downstream 0.5kb downstream 500 false chr3: 46994153-46994652 Medicago truncatula
Medtr3g102010 1.0kb upstream 1.0kb upstream 2794 true chr3: 46994653-46997446 Medicago truncatula
Medtr3g102010 1.0kb upstream 1.0kb upstream 1000 false chr3: 46996447-46997446 Medicago truncatula
Medtr3g102010 1.0kb downstream 1.0kb downstream 2794 true chr3: 46993653-46996446 Medicago truncatula
Medtr3g102010 1.0kb downstream 1.0kb downstream 1000 false chr3: 46993653-46994652 Medicago truncatula
Medtr3g102010 2.0kb upstream 2.0kb upstream 3794 true chr3: 46994653-46998446 Medicago truncatula
Medtr3g102010 2.0kb upstream 2.0kb upstream 2000 false chr3: 46996447-46998446 Medicago truncatula
Medtr3g102010 2.0kb downstream 2.0kb downstream 3794 true chr3: 46992653-46996446 Medicago truncatula
Medtr3g102010 2.0kb downstream 2.0kb downstream 2000 false chr3: 46992653-46994652 Medicago truncatula
Medtr3g102010 5.0kb upstream 5.0kb upstream 6794 true chr3: 46994653-47001446 Medicago truncatula
Medtr3g102010 5.0kb upstream 5.0kb upstream 5000 false chr3: 46996447-47001446 Medicago truncatula
Medtr3g102010 5.0kb downstream 5.0kb downstream 6794 true chr3: 46989653-46996446 Medicago truncatula
Medtr3g102010 5.0kb downstream 5.0kb downstream 5000 false chr3: 46989653-46994652 Medicago truncatula
Medtr3g102010 10.0kb upstream 10.0kb upstream 11794 true chr3: 46994653-47006446 Medicago truncatula
Medtr3g102010 10.0kb upstream 10.0kb upstream 10000 false chr3: 46996447-47006446 Medicago truncatula
Medtr3g102010 10.0kb downstream 10.0kb downstream 11794 true chr3: 46984653-46996446 Medicago truncatula
Medtr3g102010 10.0kb downstream 10.0kb downstream 10000 false chr3: 46984653-46994652 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300600 5265 Fabidae View MSA
124068484 5270 Rosid View MSA
123747860 5271 Pentapetalae View MSA
122791254 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.926     High  
cufflinks 3.35       Low
cufflinks 4.247       Low
cufflinks 50.45     High  
cufflinks 6.557        
cufflinks 36.756     High  
cufflinks 77.055     High High
cufflinks 7.081        
cufflinks 76.983     High High

0 Strain