Gene : Medtr3g101790 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13375 - FMS INTERACTING PROTEIN Description:  THO complex, protein
Genomic Order:  5581 Name:  ? Medtr3g101790
Secondary Identifier:  ? PAC:31059171
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g101790 0.5kb upstream 0.5kb upstream 7889 true chr3: 46880341-46888229 Medicago truncatula
Medtr3g101790 0.5kb upstream 0.5kb upstream 500 false chr3: 46887730-46888229 Medicago truncatula
Medtr3g101790 0.5kb downstream 0.5kb downstream 7889 true chr3: 46879841-46887729 Medicago truncatula
Medtr3g101790 0.5kb downstream 0.5kb downstream 500 false chr3: 46879841-46880340 Medicago truncatula
Medtr3g101790 1.0kb upstream 1.0kb upstream 8389 true chr3: 46880341-46888729 Medicago truncatula
Medtr3g101790 1.0kb upstream 1.0kb upstream 1000 false chr3: 46887730-46888729 Medicago truncatula
Medtr3g101790 1.0kb downstream 1.0kb downstream 8389 true chr3: 46879341-46887729 Medicago truncatula
Medtr3g101790 1.0kb downstream 1.0kb downstream 1000 false chr3: 46879341-46880340 Medicago truncatula
Medtr3g101790 2.0kb upstream 2.0kb upstream 9389 true chr3: 46880341-46889729 Medicago truncatula
Medtr3g101790 2.0kb upstream 2.0kb upstream 2000 false chr3: 46887730-46889729 Medicago truncatula
Medtr3g101790 2.0kb downstream 2.0kb downstream 9389 true chr3: 46878341-46887729 Medicago truncatula
Medtr3g101790 2.0kb downstream 2.0kb downstream 2000 false chr3: 46878341-46880340 Medicago truncatula
Medtr3g101790 5.0kb upstream 5.0kb upstream 12389 true chr3: 46880341-46892729 Medicago truncatula
Medtr3g101790 5.0kb upstream 5.0kb upstream 5000 false chr3: 46887730-46892729 Medicago truncatula
Medtr3g101790 5.0kb downstream 5.0kb downstream 12389 true chr3: 46875341-46887729 Medicago truncatula
Medtr3g101790 5.0kb downstream 5.0kb downstream 5000 false chr3: 46875341-46880340 Medicago truncatula
Medtr3g101790 10.0kb upstream 10.0kb upstream 17389 true chr3: 46880341-46897729 Medicago truncatula
Medtr3g101790 10.0kb upstream 10.0kb upstream 10000 false chr3: 46887730-46897729 Medicago truncatula
Medtr3g101790 10.0kb downstream 10.0kb downstream 17389 true chr3: 46870341-46887729 Medicago truncatula
Medtr3g101790 10.0kb downstream 10.0kb downstream 10000 false chr3: 46870341-46880340 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307391 5265 Fabidae View MSA
124064206 5270 Rosid View MSA
123737010 5271 Pentapetalae View MSA
122786339 5272 Eudicot View MSA
122045756 5273 Angiosperm View MSA
121346778 5274 Embryophyte View MSA
123425483 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.821        
cufflinks 5.713        
cufflinks 5.637        
cufflinks 2.496        
cufflinks 6.535        
cufflinks 1.082       Low
cufflinks 4.396        
cufflinks 5.523        
cufflinks 4.026        

0 Strain