Gene : Medtr3g102600 M. truncatula Mt4.0v1
Defline:  (1 of 8) PTHR26402:SF558 - TWO-COMPONENT RESPONSE REGULATOR ARR18 Description:  two-component response regulator
Genomic Order:  5629 Name:  ? Medtr3g102600
Secondary Identifier:  ? PAC:31058937
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g102600 0.5kb upstream 0.5kb upstream 2349 true chr3: 47279838-47282186 Medicago truncatula
Medtr3g102600 0.5kb upstream 0.5kb upstream 500 false chr3: 47281687-47282186 Medicago truncatula
Medtr3g102600 0.5kb downstream 0.5kb downstream 2349 true chr3: 47279338-47281686 Medicago truncatula
Medtr3g102600 0.5kb downstream 0.5kb downstream 500 false chr3: 47279338-47279837 Medicago truncatula
Medtr3g102600 1.0kb upstream 1.0kb upstream 2849 true chr3: 47279838-47282686 Medicago truncatula
Medtr3g102600 1.0kb upstream 1.0kb upstream 1000 false chr3: 47281687-47282686 Medicago truncatula
Medtr3g102600 1.0kb downstream 1.0kb downstream 2849 true chr3: 47278838-47281686 Medicago truncatula
Medtr3g102600 1.0kb downstream 1.0kb downstream 1000 false chr3: 47278838-47279837 Medicago truncatula
Medtr3g102600 2.0kb upstream 2.0kb upstream 3849 true chr3: 47279838-47283686 Medicago truncatula
Medtr3g102600 2.0kb upstream 2.0kb upstream 2000 false chr3: 47281687-47283686 Medicago truncatula
Medtr3g102600 2.0kb downstream 2.0kb downstream 3849 true chr3: 47277838-47281686 Medicago truncatula
Medtr3g102600 2.0kb downstream 2.0kb downstream 2000 false chr3: 47277838-47279837 Medicago truncatula
Medtr3g102600 5.0kb upstream 5.0kb upstream 6849 true chr3: 47279838-47286686 Medicago truncatula
Medtr3g102600 5.0kb upstream 5.0kb upstream 5000 false chr3: 47281687-47286686 Medicago truncatula
Medtr3g102600 5.0kb downstream 5.0kb downstream 6849 true chr3: 47274838-47281686 Medicago truncatula
Medtr3g102600 5.0kb downstream 5.0kb downstream 5000 false chr3: 47274838-47279837 Medicago truncatula
Medtr3g102600 10.0kb upstream 10.0kb upstream 11849 true chr3: 47279838-47291686 Medicago truncatula
Medtr3g102600 10.0kb upstream 10.0kb upstream 10000 false chr3: 47281687-47291686 Medicago truncatula
Medtr3g102600 10.0kb downstream 10.0kb downstream 11849 true chr3: 47269838-47281686 Medicago truncatula
Medtr3g102600 10.0kb downstream 10.0kb downstream 10000 false chr3: 47269838-47279837 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313890 5265 Fabidae View MSA
124074544 5270 Rosid View MSA
123752744 5271 Pentapetalae View MSA
122797364 5272 Eudicot View MSA
122048998 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.533        
cufflinks 1.276        
cufflinks 0.972        
cufflinks 2.762        
cufflinks 1.242        
cufflinks 0.47       Low
cufflinks 3.831       High
cufflinks 1.335        
cufflinks 4.825       High

0 Strain