Gene : Medtr3g102570 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11945//PTHR11945:SF200 - MADS BOX PROTEIN Description:  MADS-box transcription factor family protein
Genomic Order:  5626 Name:  ? Medtr3g102570
Secondary Identifier:  ? PAC:31057975
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g102570 0.5kb upstream 0.5kb upstream 2898 true chr3: 47268844-47271741 Medicago truncatula
Medtr3g102570 0.5kb upstream 0.5kb upstream 500 false chr3: 47271242-47271741 Medicago truncatula
Medtr3g102570 0.5kb downstream 0.5kb downstream 2898 true chr3: 47268344-47271241 Medicago truncatula
Medtr3g102570 0.5kb downstream 0.5kb downstream 500 false chr3: 47268344-47268843 Medicago truncatula
Medtr3g102570 1.0kb upstream 1.0kb upstream 3398 true chr3: 47268844-47272241 Medicago truncatula
Medtr3g102570 1.0kb upstream 1.0kb upstream 1000 false chr3: 47271242-47272241 Medicago truncatula
Medtr3g102570 1.0kb downstream 1.0kb downstream 3398 true chr3: 47267844-47271241 Medicago truncatula
Medtr3g102570 1.0kb downstream 1.0kb downstream 1000 false chr3: 47267844-47268843 Medicago truncatula
Medtr3g102570 2.0kb upstream 2.0kb upstream 4398 true chr3: 47268844-47273241 Medicago truncatula
Medtr3g102570 2.0kb upstream 2.0kb upstream 2000 false chr3: 47271242-47273241 Medicago truncatula
Medtr3g102570 2.0kb downstream 2.0kb downstream 4398 true chr3: 47266844-47271241 Medicago truncatula
Medtr3g102570 2.0kb downstream 2.0kb downstream 2000 false chr3: 47266844-47268843 Medicago truncatula
Medtr3g102570 5.0kb upstream 5.0kb upstream 7398 true chr3: 47268844-47276241 Medicago truncatula
Medtr3g102570 5.0kb upstream 5.0kb upstream 5000 false chr3: 47271242-47276241 Medicago truncatula
Medtr3g102570 5.0kb downstream 5.0kb downstream 7398 true chr3: 47263844-47271241 Medicago truncatula
Medtr3g102570 5.0kb downstream 5.0kb downstream 5000 false chr3: 47263844-47268843 Medicago truncatula
Medtr3g102570 10.0kb upstream 10.0kb upstream 12398 true chr3: 47268844-47281241 Medicago truncatula
Medtr3g102570 10.0kb upstream 10.0kb upstream 10000 false chr3: 47271242-47281241 Medicago truncatula
Medtr3g102570 10.0kb downstream 10.0kb downstream 12398 true chr3: 47258844-47271241 Medicago truncatula
Medtr3g102570 10.0kb downstream 10.0kb downstream 10000 false chr3: 47258844-47268843 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310238 5265 Fabidae View MSA
124069767 5270 Rosid View MSA
123753647 5271 Pentapetalae View MSA
122786853 5272 Eudicot View MSA
122050633 5273 Angiosperm View MSA
121350455 5274 Embryophyte View MSA
123427239 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed

0 Strain