Gene : Medtr3g102270 M. truncatula Mt4.0v1
Defline:  (1 of 6) PF11523 - Protein of unknown function (DUF3223) (DUF3223) Description:  DCL protein
Genomic Order:  5606 Name:  ? Medtr3g102270
Secondary Identifier:  ? PAC:31059612
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g102270 0.5kb upstream 0.5kb upstream 7120 true chr3: 47130765-47137884 Medicago truncatula
Medtr3g102270 0.5kb upstream 0.5kb upstream 500 false chr3: 47130765-47131264 Medicago truncatula
Medtr3g102270 0.5kb downstream 0.5kb downstream 7120 true chr3: 47131265-47138384 Medicago truncatula
Medtr3g102270 0.5kb downstream 0.5kb downstream 500 false chr3: 47137885-47138384 Medicago truncatula
Medtr3g102270 1.0kb upstream 1.0kb upstream 7620 true chr3: 47130265-47137884 Medicago truncatula
Medtr3g102270 1.0kb upstream 1.0kb upstream 1000 false chr3: 47130265-47131264 Medicago truncatula
Medtr3g102270 1.0kb downstream 1.0kb downstream 7620 true chr3: 47131265-47138884 Medicago truncatula
Medtr3g102270 1.0kb downstream 1.0kb downstream 1000 false chr3: 47137885-47138884 Medicago truncatula
Medtr3g102270 2.0kb upstream 2.0kb upstream 8620 true chr3: 47129265-47137884 Medicago truncatula
Medtr3g102270 2.0kb upstream 2.0kb upstream 2000 false chr3: 47129265-47131264 Medicago truncatula
Medtr3g102270 2.0kb downstream 2.0kb downstream 8620 true chr3: 47131265-47139884 Medicago truncatula
Medtr3g102270 2.0kb downstream 2.0kb downstream 2000 false chr3: 47137885-47139884 Medicago truncatula
Medtr3g102270 5.0kb upstream 5.0kb upstream 11620 true chr3: 47126265-47137884 Medicago truncatula
Medtr3g102270 5.0kb upstream 5.0kb upstream 5000 false chr3: 47126265-47131264 Medicago truncatula
Medtr3g102270 5.0kb downstream 5.0kb downstream 11620 true chr3: 47131265-47142884 Medicago truncatula
Medtr3g102270 5.0kb downstream 5.0kb downstream 5000 false chr3: 47137885-47142884 Medicago truncatula
Medtr3g102270 10.0kb upstream 10.0kb upstream 16620 true chr3: 47121265-47137884 Medicago truncatula
Medtr3g102270 10.0kb upstream 10.0kb upstream 10000 false chr3: 47121265-47131264 Medicago truncatula
Medtr3g102270 10.0kb downstream 10.0kb downstream 16620 true chr3: 47131265-47147884 Medicago truncatula
Medtr3g102270 10.0kb downstream 10.0kb downstream 10000 false chr3: 47137885-47147884 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299607 5265 Fabidae View MSA
124065734 5270 Rosid View MSA
123737001 5271 Pentapetalae View MSA
122786246 5272 Eudicot View MSA
122047145 5273 Angiosperm View MSA
121351561 5274 Embryophyte View MSA
123426725 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.246        
cufflinks 0.888        
cufflinks 0.936        
cufflinks 0.293        
cufflinks 1.443       High
cufflinks 0.167       Low
cufflinks 0.326        
cufflinks 0.837        
cufflinks 0.517        

0 Strain