Gene : Medtr3g103300 M. truncatula Mt4.0v1
Defline:  (1 of 1) 2.3.1.43 - Phosphatidylcholine--sterol O-acyltransferase / Phospholipid--cholesterol acyltransferase Description:  lecithin:cholesterol acyltransferase family protein
Genomic Order:  5682 Name:  ? Medtr3g103300
Secondary Identifier:  ? PAC:31061389
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g103300 0.5kb upstream 0.5kb upstream 3486 true chr3: 47642478-47645963 Medicago truncatula
Medtr3g103300 0.5kb upstream 0.5kb upstream 500 false chr3: 47642478-47642977 Medicago truncatula
Medtr3g103300 0.5kb downstream 0.5kb downstream 3486 true chr3: 47642978-47646463 Medicago truncatula
Medtr3g103300 0.5kb downstream 0.5kb downstream 500 false chr3: 47645964-47646463 Medicago truncatula
Medtr3g103300 1.0kb upstream 1.0kb upstream 3986 true chr3: 47641978-47645963 Medicago truncatula
Medtr3g103300 1.0kb upstream 1.0kb upstream 1000 false chr3: 47641978-47642977 Medicago truncatula
Medtr3g103300 1.0kb downstream 1.0kb downstream 3986 true chr3: 47642978-47646963 Medicago truncatula
Medtr3g103300 1.0kb downstream 1.0kb downstream 1000 false chr3: 47645964-47646963 Medicago truncatula
Medtr3g103300 2.0kb upstream 2.0kb upstream 4986 true chr3: 47640978-47645963 Medicago truncatula
Medtr3g103300 2.0kb upstream 2.0kb upstream 2000 false chr3: 47640978-47642977 Medicago truncatula
Medtr3g103300 2.0kb downstream 2.0kb downstream 4986 true chr3: 47642978-47647963 Medicago truncatula
Medtr3g103300 2.0kb downstream 2.0kb downstream 2000 false chr3: 47645964-47647963 Medicago truncatula
Medtr3g103300 5.0kb upstream 5.0kb upstream 7986 true chr3: 47637978-47645963 Medicago truncatula
Medtr3g103300 5.0kb upstream 5.0kb upstream 5000 false chr3: 47637978-47642977 Medicago truncatula
Medtr3g103300 5.0kb downstream 5.0kb downstream 7986 true chr3: 47642978-47650963 Medicago truncatula
Medtr3g103300 5.0kb downstream 5.0kb downstream 5000 false chr3: 47645964-47650963 Medicago truncatula
Medtr3g103300 10.0kb upstream 10.0kb upstream 12986 true chr3: 47632978-47645963 Medicago truncatula
Medtr3g103300 10.0kb upstream 10.0kb upstream 10000 false chr3: 47632978-47642977 Medicago truncatula
Medtr3g103300 10.0kb downstream 10.0kb downstream 12986 true chr3: 47642978-47655963 Medicago truncatula
Medtr3g103300 10.0kb downstream 10.0kb downstream 10000 false chr3: 47645964-47655963 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299956 5265 Fabidae View MSA
124050426 5270 Rosid View MSA
123738135 5271 Pentapetalae View MSA
122785925 5272 Eudicot View MSA
122051550 5273 Angiosperm View MSA
121347013 5274 Embryophyte View MSA
123427608 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 5.129        
cufflinks 1.778        
cufflinks 0.039     Low  
cufflinks 5.866        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 3.674        
cufflinks 0.032     Low  

0 Strain