Gene : Medtr3g103270 M. truncatula Mt4.0v1
Defline:  (1 of 1) 3.6.3.35 - Manganese-transporting ATPase / ABC-type manganese permease complex Description:  sarco/endoplasmic reticulum calcium ATPase
Genomic Order:  5680 Name:  ? Medtr3g103270
Secondary Identifier:  ? PAC:31058860
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g103270 0.5kb upstream 0.5kb upstream 28076 true chr3: 47601380-47629455 Medicago truncatula
Medtr3g103270 0.5kb upstream 0.5kb upstream 500 false chr3: 47601380-47601879 Medicago truncatula
Medtr3g103270 0.5kb downstream 0.5kb downstream 28076 true chr3: 47601880-47629955 Medicago truncatula
Medtr3g103270 0.5kb downstream 0.5kb downstream 500 false chr3: 47629456-47629955 Medicago truncatula
Medtr3g103270 1.0kb upstream 1.0kb upstream 28576 true chr3: 47600880-47629455 Medicago truncatula
Medtr3g103270 1.0kb upstream 1.0kb upstream 1000 false chr3: 47600880-47601879 Medicago truncatula
Medtr3g103270 1.0kb downstream 1.0kb downstream 28576 true chr3: 47601880-47630455 Medicago truncatula
Medtr3g103270 1.0kb downstream 1.0kb downstream 1000 false chr3: 47629456-47630455 Medicago truncatula
Medtr3g103270 2.0kb upstream 2.0kb upstream 29576 true chr3: 47599880-47629455 Medicago truncatula
Medtr3g103270 2.0kb upstream 2.0kb upstream 2000 false chr3: 47599880-47601879 Medicago truncatula
Medtr3g103270 2.0kb downstream 2.0kb downstream 29576 true chr3: 47601880-47631455 Medicago truncatula
Medtr3g103270 2.0kb downstream 2.0kb downstream 2000 false chr3: 47629456-47631455 Medicago truncatula
Medtr3g103270 5.0kb upstream 5.0kb upstream 32576 true chr3: 47596880-47629455 Medicago truncatula
Medtr3g103270 5.0kb upstream 5.0kb upstream 5000 false chr3: 47596880-47601879 Medicago truncatula
Medtr3g103270 5.0kb downstream 5.0kb downstream 32576 true chr3: 47601880-47634455 Medicago truncatula
Medtr3g103270 5.0kb downstream 5.0kb downstream 5000 false chr3: 47629456-47634455 Medicago truncatula
Medtr3g103270 10.0kb upstream 10.0kb upstream 37576 true chr3: 47591880-47629455 Medicago truncatula
Medtr3g103270 10.0kb upstream 10.0kb upstream 10000 false chr3: 47591880-47601879 Medicago truncatula
Medtr3g103270 10.0kb downstream 10.0kb downstream 37576 true chr3: 47601880-47639455 Medicago truncatula
Medtr3g103270 10.0kb downstream 10.0kb downstream 10000 false chr3: 47629456-47639455 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303369 5265 Fabidae View MSA
124070166 5270 Rosid View MSA
123740324 5271 Pentapetalae View MSA
122794495 5272 Eudicot View MSA
122046254 5273 Angiosperm View MSA
121349492 5274 Embryophyte View MSA
123427421 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.945        
cufflinks 1.249        
cufflinks 1.215        
cufflinks 0.338       Low
cufflinks 1.647       High
cufflinks 0.174       Low
cufflinks 0.603        
cufflinks 1.071        
cufflinks 0.617        

0 Strain