Gene : Medtr3g103090 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12354 - INTERFERON-RELATED DEVELOPMENTAL REGULATOR Description:  interferon-related developmental regulator-like protein
Genomic Order:  5665 Name:  ? Medtr3g103090
Secondary Identifier:  ? PAC:31054849
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g103090 0.5kb upstream 0.5kb upstream 4958 true chr3: 47512216-47517173 Medicago truncatula
Medtr3g103090 0.5kb upstream 0.5kb upstream 500 false chr3: 47512216-47512715 Medicago truncatula
Medtr3g103090 0.5kb downstream 0.5kb downstream 4958 true chr3: 47512716-47517673 Medicago truncatula
Medtr3g103090 0.5kb downstream 0.5kb downstream 500 false chr3: 47517174-47517673 Medicago truncatula
Medtr3g103090 1.0kb upstream 1.0kb upstream 5458 true chr3: 47511716-47517173 Medicago truncatula
Medtr3g103090 1.0kb upstream 1.0kb upstream 1000 false chr3: 47511716-47512715 Medicago truncatula
Medtr3g103090 1.0kb downstream 1.0kb downstream 5458 true chr3: 47512716-47518173 Medicago truncatula
Medtr3g103090 1.0kb downstream 1.0kb downstream 1000 false chr3: 47517174-47518173 Medicago truncatula
Medtr3g103090 2.0kb upstream 2.0kb upstream 6458 true chr3: 47510716-47517173 Medicago truncatula
Medtr3g103090 2.0kb upstream 2.0kb upstream 2000 false chr3: 47510716-47512715 Medicago truncatula
Medtr3g103090 2.0kb downstream 2.0kb downstream 6458 true chr3: 47512716-47519173 Medicago truncatula
Medtr3g103090 2.0kb downstream 2.0kb downstream 2000 false chr3: 47517174-47519173 Medicago truncatula
Medtr3g103090 5.0kb upstream 5.0kb upstream 9458 true chr3: 47507716-47517173 Medicago truncatula
Medtr3g103090 5.0kb upstream 5.0kb upstream 5000 false chr3: 47507716-47512715 Medicago truncatula
Medtr3g103090 5.0kb downstream 5.0kb downstream 9458 true chr3: 47512716-47522173 Medicago truncatula
Medtr3g103090 5.0kb downstream 5.0kb downstream 5000 false chr3: 47517174-47522173 Medicago truncatula
Medtr3g103090 10.0kb upstream 10.0kb upstream 14458 true chr3: 47502716-47517173 Medicago truncatula
Medtr3g103090 10.0kb upstream 10.0kb upstream 10000 false chr3: 47502716-47512715 Medicago truncatula
Medtr3g103090 10.0kb downstream 10.0kb downstream 14458 true chr3: 47512716-47527173 Medicago truncatula
Medtr3g103090 10.0kb downstream 10.0kb downstream 10000 false chr3: 47517174-47527173 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310652 5265 Fabidae View MSA
124065398 5270 Rosid View MSA
123738030 5271 Pentapetalae View MSA
122785868 5272 Eudicot View MSA
122043831 5273 Angiosperm View MSA
121349485 5274 Embryophyte View MSA
123428444 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.281     High High
cufflinks 13.593     High  
cufflinks 12.005     High  
cufflinks 5.152       Low
cufflinks 10.722     High  
cufflinks 13.121     High  
cufflinks 26.908     High  
cufflinks 8.396        
cufflinks 24.872     High  

0 Strain