Gene : Medtr3g103080 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR10177:SF255 - CYCLIN-D5-1 Description:  carboxy-terminal domain cyclin
Genomic Order:  5664 Name:  ? Medtr3g103080
Secondary Identifier:  ? PAC:31058846
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g103080 0.5kb upstream 0.5kb upstream 2797 true chr3: 47493059-47495855 Medicago truncatula
Medtr3g103080 0.5kb upstream 0.5kb upstream 500 false chr3: 47495356-47495855 Medicago truncatula
Medtr3g103080 0.5kb downstream 0.5kb downstream 2797 true chr3: 47492559-47495355 Medicago truncatula
Medtr3g103080 0.5kb downstream 0.5kb downstream 500 false chr3: 47492559-47493058 Medicago truncatula
Medtr3g103080 1.0kb upstream 1.0kb upstream 3297 true chr3: 47493059-47496355 Medicago truncatula
Medtr3g103080 1.0kb upstream 1.0kb upstream 1000 false chr3: 47495356-47496355 Medicago truncatula
Medtr3g103080 1.0kb downstream 1.0kb downstream 3297 true chr3: 47492059-47495355 Medicago truncatula
Medtr3g103080 1.0kb downstream 1.0kb downstream 1000 false chr3: 47492059-47493058 Medicago truncatula
Medtr3g103080 2.0kb upstream 2.0kb upstream 4297 true chr3: 47493059-47497355 Medicago truncatula
Medtr3g103080 2.0kb upstream 2.0kb upstream 2000 false chr3: 47495356-47497355 Medicago truncatula
Medtr3g103080 2.0kb downstream 2.0kb downstream 4297 true chr3: 47491059-47495355 Medicago truncatula
Medtr3g103080 2.0kb downstream 2.0kb downstream 2000 false chr3: 47491059-47493058 Medicago truncatula
Medtr3g103080 5.0kb upstream 5.0kb upstream 7297 true chr3: 47493059-47500355 Medicago truncatula
Medtr3g103080 5.0kb upstream 5.0kb upstream 5000 false chr3: 47495356-47500355 Medicago truncatula
Medtr3g103080 5.0kb downstream 5.0kb downstream 7297 true chr3: 47488059-47495355 Medicago truncatula
Medtr3g103080 5.0kb downstream 5.0kb downstream 5000 false chr3: 47488059-47493058 Medicago truncatula
Medtr3g103080 10.0kb upstream 10.0kb upstream 12297 true chr3: 47493059-47505355 Medicago truncatula
Medtr3g103080 10.0kb upstream 10.0kb upstream 10000 false chr3: 47495356-47505355 Medicago truncatula
Medtr3g103080 10.0kb downstream 10.0kb downstream 12297 true chr3: 47483059-47495355 Medicago truncatula
Medtr3g103080 10.0kb downstream 10.0kb downstream 10000 false chr3: 47483059-47493058 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313821 5265 Fabidae View MSA
124070747 5270 Rosid View MSA
123751298 5271 Pentapetalae View MSA
122797790 5272 Eudicot View MSA
122049742 5273 Angiosperm View MSA
121311569 5274 Embryophyte View MSA
123428428 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.039     Low Low
cufflinks 0.277        
cufflinks 0.159        
cufflinks 0.021     Low Low
cufflinks 0.283       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.093        
cufflinks 0.131        
cufflinks 0.185        

0 Strain