Gene : Medtr3g094000 M. truncatula Mt4.0v1
Defline:  (1 of 9) PTHR14155//PTHR14155:SF106 - RING FINGER DOMAIN-CONTAINING Description:  RING-H2 zinc finger protein
Genomic Order:  5049 Name:  ? Medtr3g094000
Secondary Identifier:  ? PAC:31053336
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g094000 0.5kb upstream 0.5kb upstream 2402 true chr3: 42944478-42946879 Medicago truncatula
Medtr3g094000 0.5kb upstream 0.5kb upstream 500 false chr3: 42946380-42946879 Medicago truncatula
Medtr3g094000 0.5kb downstream 0.5kb downstream 2402 true chr3: 42943978-42946379 Medicago truncatula
Medtr3g094000 0.5kb downstream 0.5kb downstream 500 false chr3: 42943978-42944477 Medicago truncatula
Medtr3g094000 1.0kb upstream 1.0kb upstream 2902 true chr3: 42944478-42947379 Medicago truncatula
Medtr3g094000 1.0kb upstream 1.0kb upstream 1000 false chr3: 42946380-42947379 Medicago truncatula
Medtr3g094000 1.0kb downstream 1.0kb downstream 2902 true chr3: 42943478-42946379 Medicago truncatula
Medtr3g094000 1.0kb downstream 1.0kb downstream 1000 false chr3: 42943478-42944477 Medicago truncatula
Medtr3g094000 2.0kb upstream 2.0kb upstream 3902 true chr3: 42944478-42948379 Medicago truncatula
Medtr3g094000 2.0kb upstream 2.0kb upstream 2000 false chr3: 42946380-42948379 Medicago truncatula
Medtr3g094000 2.0kb downstream 2.0kb downstream 3902 true chr3: 42942478-42946379 Medicago truncatula
Medtr3g094000 2.0kb downstream 2.0kb downstream 2000 false chr3: 42942478-42944477 Medicago truncatula
Medtr3g094000 5.0kb upstream 5.0kb upstream 6902 true chr3: 42944478-42951379 Medicago truncatula
Medtr3g094000 5.0kb upstream 5.0kb upstream 5000 false chr3: 42946380-42951379 Medicago truncatula
Medtr3g094000 5.0kb downstream 5.0kb downstream 6902 true chr3: 42939478-42946379 Medicago truncatula
Medtr3g094000 5.0kb downstream 5.0kb downstream 5000 false chr3: 42939478-42944477 Medicago truncatula
Medtr3g094000 10.0kb upstream 10.0kb upstream 11902 true chr3: 42944478-42956379 Medicago truncatula
Medtr3g094000 10.0kb upstream 10.0kb upstream 10000 false chr3: 42946380-42956379 Medicago truncatula
Medtr3g094000 10.0kb downstream 10.0kb downstream 11902 true chr3: 42934478-42946379 Medicago truncatula
Medtr3g094000 10.0kb downstream 10.0kb downstream 10000 false chr3: 42934478-42944477 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311003 5265 Fabidae View MSA
124069529 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.197        
cufflinks 14.995     High  
cufflinks 19.063     High High
cufflinks 0.528        
cufflinks 15.443     High  
cufflinks 0.058     Low Low
cufflinks 0.606        
cufflinks 16.512     High  
cufflinks 0.448        

0 Strain