Gene : Medtr3g093960 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR33644:SF3 - U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED Description:  U-box protein
Genomic Order:  5046 Name:  ? Medtr3g093960
Secondary Identifier:  ? PAC:31057176
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g093960 0.5kb upstream 0.5kb upstream 6598 true chr3: 42923144-42929741 Medicago truncatula
Medtr3g093960 0.5kb upstream 0.5kb upstream 500 false chr3: 42923144-42923643 Medicago truncatula
Medtr3g093960 0.5kb downstream 0.5kb downstream 6598 true chr3: 42923644-42930241 Medicago truncatula
Medtr3g093960 0.5kb downstream 0.5kb downstream 500 false chr3: 42929742-42930241 Medicago truncatula
Medtr3g093960 1.0kb upstream 1.0kb upstream 7098 true chr3: 42922644-42929741 Medicago truncatula
Medtr3g093960 1.0kb upstream 1.0kb upstream 1000 false chr3: 42922644-42923643 Medicago truncatula
Medtr3g093960 1.0kb downstream 1.0kb downstream 7098 true chr3: 42923644-42930741 Medicago truncatula
Medtr3g093960 1.0kb downstream 1.0kb downstream 1000 false chr3: 42929742-42930741 Medicago truncatula
Medtr3g093960 2.0kb upstream 2.0kb upstream 8098 true chr3: 42921644-42929741 Medicago truncatula
Medtr3g093960 2.0kb upstream 2.0kb upstream 2000 false chr3: 42921644-42923643 Medicago truncatula
Medtr3g093960 2.0kb downstream 2.0kb downstream 8098 true chr3: 42923644-42931741 Medicago truncatula
Medtr3g093960 2.0kb downstream 2.0kb downstream 2000 false chr3: 42929742-42931741 Medicago truncatula
Medtr3g093960 5.0kb upstream 5.0kb upstream 11098 true chr3: 42918644-42929741 Medicago truncatula
Medtr3g093960 5.0kb upstream 5.0kb upstream 5000 false chr3: 42918644-42923643 Medicago truncatula
Medtr3g093960 5.0kb downstream 5.0kb downstream 11098 true chr3: 42923644-42934741 Medicago truncatula
Medtr3g093960 5.0kb downstream 5.0kb downstream 5000 false chr3: 42929742-42934741 Medicago truncatula
Medtr3g093960 10.0kb upstream 10.0kb upstream 16098 true chr3: 42913644-42929741 Medicago truncatula
Medtr3g093960 10.0kb upstream 10.0kb upstream 10000 false chr3: 42913644-42923643 Medicago truncatula
Medtr3g093960 10.0kb downstream 10.0kb downstream 16098 true chr3: 42923644-42939741 Medicago truncatula
Medtr3g093960 10.0kb downstream 10.0kb downstream 10000 false chr3: 42929742-42939741 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308467 5265 Fabidae View MSA
124067678 5270 Rosid View MSA
123739298 5271 Pentapetalae View MSA
122793350 5272 Eudicot View MSA
122045751 5273 Angiosperm View MSA
121348831 5274 Embryophyte View MSA
123381033 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.72        
cufflinks 0.752        
cufflinks 1.138       High
cufflinks 0.294        
cufflinks 0.839        
cufflinks 0.176       Low
cufflinks 0.517        
cufflinks 0.855        
cufflinks 0.324        

0 Strain