Gene : Medtr3g094840 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR32438:SF5 - 4-ALPHA-GLUCANOTRANSFERASE DPE1, CHLOROPLASTIC/AMYLOPLASTIC Description:  4-alpha-glucanotransferase/amyloplastic protein
Genomic Order:  5092 Name:  ? Medtr3g094840
Secondary Identifier:  ? PAC:31054031
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5941 Medicago truncatula pathologic  
Mtruncatula PWY-6724 Medicago truncatula pathologic  
Mtruncatula PWY-7238 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g094840 0.5kb upstream 0.5kb upstream 6145 true chr3: 43285537-43291681 Medicago truncatula
Medtr3g094840 0.5kb upstream 0.5kb upstream 500 false chr3: 43285537-43286036 Medicago truncatula
Medtr3g094840 0.5kb downstream 0.5kb downstream 6145 true chr3: 43286037-43292181 Medicago truncatula
Medtr3g094840 0.5kb downstream 0.5kb downstream 500 false chr3: 43291682-43292181 Medicago truncatula
Medtr3g094840 1.0kb upstream 1.0kb upstream 6645 true chr3: 43285037-43291681 Medicago truncatula
Medtr3g094840 1.0kb upstream 1.0kb upstream 1000 false chr3: 43285037-43286036 Medicago truncatula
Medtr3g094840 1.0kb downstream 1.0kb downstream 6645 true chr3: 43286037-43292681 Medicago truncatula
Medtr3g094840 1.0kb downstream 1.0kb downstream 1000 false chr3: 43291682-43292681 Medicago truncatula
Medtr3g094840 2.0kb upstream 2.0kb upstream 7645 true chr3: 43284037-43291681 Medicago truncatula
Medtr3g094840 2.0kb upstream 2.0kb upstream 2000 false chr3: 43284037-43286036 Medicago truncatula
Medtr3g094840 2.0kb downstream 2.0kb downstream 7645 true chr3: 43286037-43293681 Medicago truncatula
Medtr3g094840 2.0kb downstream 2.0kb downstream 2000 false chr3: 43291682-43293681 Medicago truncatula
Medtr3g094840 5.0kb upstream 5.0kb upstream 10645 true chr3: 43281037-43291681 Medicago truncatula
Medtr3g094840 5.0kb upstream 5.0kb upstream 5000 false chr3: 43281037-43286036 Medicago truncatula
Medtr3g094840 5.0kb downstream 5.0kb downstream 10645 true chr3: 43286037-43296681 Medicago truncatula
Medtr3g094840 5.0kb downstream 5.0kb downstream 5000 false chr3: 43291682-43296681 Medicago truncatula
Medtr3g094840 10.0kb upstream 10.0kb upstream 15645 true chr3: 43276037-43291681 Medicago truncatula
Medtr3g094840 10.0kb upstream 10.0kb upstream 10000 false chr3: 43276037-43286036 Medicago truncatula
Medtr3g094840 10.0kb downstream 10.0kb downstream 15645 true chr3: 43286037-43301681 Medicago truncatula
Medtr3g094840 10.0kb downstream 10.0kb downstream 10000 false chr3: 43291682-43301681 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308920 5265 Fabidae View MSA
124069427 5270 Rosid View MSA
123741915 5271 Pentapetalae View MSA
122794283 5272 Eudicot View MSA
122048475 5273 Angiosperm View MSA
121348239 5274 Embryophyte View MSA
123427426 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.257        
cufflinks 2.47        
cufflinks 1.687        
cufflinks 0.381       Low
cufflinks 2.8       High
cufflinks 0.324       Low
cufflinks 0.529        
cufflinks 1.757        
cufflinks 1.139        

0 Strain