Gene : Medtr3g095490 M. truncatula Mt4.0v1
Defline:  (1 of 3) 6.3.5.5 - Carbamoyl-phosphate synthase (glutamine-hydrolyzing) / Glutamine-dependent carbamyl phosphate synthetase Description:  carbamoylphosphate synthase small subunit
Genomic Order:  5132 Name:  ? Medtr3g095490
Secondary Identifier:  ? PAC:31054770
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7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula ARGSYNBSUB-PWY Medicago truncatula pathologic  
Mtruncatula ARGSYN-PWY Medicago truncatula pathologic  
Mtruncatula GLUTAMINDEG-PWY Medicago truncatula pathologic  
Mtruncatula PWY0-162 Medicago truncatula pathologic  
Mtruncatula PWY-4984 Medicago truncatula pathologic  
Mtruncatula PWY-5686 Medicago truncatula pathologic  
Mtruncatula PWY-7211 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g095490 0.5kb upstream 0.5kb upstream 3948 true chr3: 43632352-43636299 Medicago truncatula
Medtr3g095490 0.5kb upstream 0.5kb upstream 500 false chr3: 43632352-43632851 Medicago truncatula
Medtr3g095490 0.5kb downstream 0.5kb downstream 3948 true chr3: 43632852-43636799 Medicago truncatula
Medtr3g095490 0.5kb downstream 0.5kb downstream 500 false chr3: 43636300-43636799 Medicago truncatula
Medtr3g095490 1.0kb upstream 1.0kb upstream 4448 true chr3: 43631852-43636299 Medicago truncatula
Medtr3g095490 1.0kb upstream 1.0kb upstream 1000 false chr3: 43631852-43632851 Medicago truncatula
Medtr3g095490 1.0kb downstream 1.0kb downstream 4448 true chr3: 43632852-43637299 Medicago truncatula
Medtr3g095490 1.0kb downstream 1.0kb downstream 1000 false chr3: 43636300-43637299 Medicago truncatula
Medtr3g095490 2.0kb upstream 2.0kb upstream 5448 true chr3: 43630852-43636299 Medicago truncatula
Medtr3g095490 2.0kb upstream 2.0kb upstream 2000 false chr3: 43630852-43632851 Medicago truncatula
Medtr3g095490 2.0kb downstream 2.0kb downstream 5448 true chr3: 43632852-43638299 Medicago truncatula
Medtr3g095490 2.0kb downstream 2.0kb downstream 2000 false chr3: 43636300-43638299 Medicago truncatula
Medtr3g095490 5.0kb upstream 5.0kb upstream 8448 true chr3: 43627852-43636299 Medicago truncatula
Medtr3g095490 5.0kb upstream 5.0kb upstream 5000 false chr3: 43627852-43632851 Medicago truncatula
Medtr3g095490 5.0kb downstream 5.0kb downstream 8448 true chr3: 43632852-43641299 Medicago truncatula
Medtr3g095490 5.0kb downstream 5.0kb downstream 5000 false chr3: 43636300-43641299 Medicago truncatula
Medtr3g095490 10.0kb upstream 10.0kb upstream 13448 true chr3: 43622852-43636299 Medicago truncatula
Medtr3g095490 10.0kb upstream 10.0kb upstream 10000 false chr3: 43622852-43632851 Medicago truncatula
Medtr3g095490 10.0kb downstream 10.0kb downstream 13448 true chr3: 43632852-43646299 Medicago truncatula
Medtr3g095490 10.0kb downstream 10.0kb downstream 10000 false chr3: 43636300-43646299 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121621990 5273 Angiosperm Singleton cluster - no MSA
122259576 5265 Fabidae Singleton cluster - no MSA
124001013 5270 Rosid Singleton cluster - no MSA
123575228 5271 Pentapetalae Singleton cluster - no MSA
122609943 5272 Eudicot Singleton cluster - no MSA
120894094 5274 Embryophyte Singleton cluster - no MSA
122934749 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.067       Low
cufflinks 13.401     High  
cufflinks 8.782        
cufflinks 3.569        
cufflinks 15.614     High High
cufflinks 0.993       Low
cufflinks 4.22        
cufflinks 10.649     High  
cufflinks 6.213        

0 Strain