Gene : Medtr3g095240 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR13516//PTHR13516:SF9 - RIBONUCLEASE P SUBUNIT P25 Description:  DNA-binding protein alba protein
Genomic Order:  5118 Name:  ? Medtr3g095240
Secondary Identifier:  ? PAC:31060408
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g095240 0.5kb upstream 0.5kb upstream 3592 true chr3: 43521665-43525256 Medicago truncatula
Medtr3g095240 0.5kb upstream 0.5kb upstream 500 false chr3: 43521665-43522164 Medicago truncatula
Medtr3g095240 0.5kb downstream 0.5kb downstream 3592 true chr3: 43522165-43525756 Medicago truncatula
Medtr3g095240 0.5kb downstream 0.5kb downstream 500 false chr3: 43525257-43525756 Medicago truncatula
Medtr3g095240 1.0kb upstream 1.0kb upstream 4092 true chr3: 43521165-43525256 Medicago truncatula
Medtr3g095240 1.0kb upstream 1.0kb upstream 1000 false chr3: 43521165-43522164 Medicago truncatula
Medtr3g095240 1.0kb downstream 1.0kb downstream 4092 true chr3: 43522165-43526256 Medicago truncatula
Medtr3g095240 1.0kb downstream 1.0kb downstream 1000 false chr3: 43525257-43526256 Medicago truncatula
Medtr3g095240 2.0kb upstream 2.0kb upstream 5092 true chr3: 43520165-43525256 Medicago truncatula
Medtr3g095240 2.0kb upstream 2.0kb upstream 2000 false chr3: 43520165-43522164 Medicago truncatula
Medtr3g095240 2.0kb downstream 2.0kb downstream 5092 true chr3: 43522165-43527256 Medicago truncatula
Medtr3g095240 2.0kb downstream 2.0kb downstream 2000 false chr3: 43525257-43527256 Medicago truncatula
Medtr3g095240 5.0kb upstream 5.0kb upstream 8092 true chr3: 43517165-43525256 Medicago truncatula
Medtr3g095240 5.0kb upstream 5.0kb upstream 5000 false chr3: 43517165-43522164 Medicago truncatula
Medtr3g095240 5.0kb downstream 5.0kb downstream 8092 true chr3: 43522165-43530256 Medicago truncatula
Medtr3g095240 5.0kb downstream 5.0kb downstream 5000 false chr3: 43525257-43530256 Medicago truncatula
Medtr3g095240 10.0kb upstream 10.0kb upstream 13092 true chr3: 43512165-43525256 Medicago truncatula
Medtr3g095240 10.0kb upstream 10.0kb upstream 10000 false chr3: 43512165-43522164 Medicago truncatula
Medtr3g095240 10.0kb downstream 10.0kb downstream 13092 true chr3: 43522165-43535256 Medicago truncatula
Medtr3g095240 10.0kb downstream 10.0kb downstream 10000 false chr3: 43525257-43535256 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295452 5265 Fabidae View MSA
124072183 5270 Rosid View MSA
123752020 5271 Pentapetalae View MSA
122793375 5272 Eudicot View MSA
122050157 5273 Angiosperm View MSA
121346602 5274 Embryophyte View MSA
123428727 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.057     High Low
cufflinks 10.357     High  
cufflinks 12.599     High  
cufflinks 35.304     High High
cufflinks 16.755     High  
cufflinks 44.786     High High
cufflinks 16.507     High  
cufflinks 11.807     High  
cufflinks 18.919     High  

0 Strain