Gene : Medtr3g095260 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR13516//PTHR13516:SF9 - RIBONUCLEASE P SUBUNIT P25 Description:  Rpp20 subunit of nuclear RNase MRP and P protein
Genomic Order:  5120 Name:  ? Medtr3g095260
Secondary Identifier:  ? PAC:31061129
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g095260 0.5kb upstream 0.5kb upstream 5219 true chr3: 43534701-43539919 Medicago truncatula
Medtr3g095260 0.5kb upstream 0.5kb upstream 500 false chr3: 43534701-43535200 Medicago truncatula
Medtr3g095260 0.5kb downstream 0.5kb downstream 5219 true chr3: 43535201-43540419 Medicago truncatula
Medtr3g095260 0.5kb downstream 0.5kb downstream 500 false chr3: 43539920-43540419 Medicago truncatula
Medtr3g095260 1.0kb upstream 1.0kb upstream 5719 true chr3: 43534201-43539919 Medicago truncatula
Medtr3g095260 1.0kb upstream 1.0kb upstream 1000 false chr3: 43534201-43535200 Medicago truncatula
Medtr3g095260 1.0kb downstream 1.0kb downstream 5719 true chr3: 43535201-43540919 Medicago truncatula
Medtr3g095260 1.0kb downstream 1.0kb downstream 1000 false chr3: 43539920-43540919 Medicago truncatula
Medtr3g095260 2.0kb upstream 2.0kb upstream 6719 true chr3: 43533201-43539919 Medicago truncatula
Medtr3g095260 2.0kb upstream 2.0kb upstream 2000 false chr3: 43533201-43535200 Medicago truncatula
Medtr3g095260 2.0kb downstream 2.0kb downstream 6719 true chr3: 43535201-43541919 Medicago truncatula
Medtr3g095260 2.0kb downstream 2.0kb downstream 2000 false chr3: 43539920-43541919 Medicago truncatula
Medtr3g095260 5.0kb upstream 5.0kb upstream 9719 true chr3: 43530201-43539919 Medicago truncatula
Medtr3g095260 5.0kb upstream 5.0kb upstream 5000 false chr3: 43530201-43535200 Medicago truncatula
Medtr3g095260 5.0kb downstream 5.0kb downstream 9719 true chr3: 43535201-43544919 Medicago truncatula
Medtr3g095260 5.0kb downstream 5.0kb downstream 5000 false chr3: 43539920-43544919 Medicago truncatula
Medtr3g095260 10.0kb upstream 10.0kb upstream 14719 true chr3: 43525201-43539919 Medicago truncatula
Medtr3g095260 10.0kb upstream 10.0kb upstream 10000 false chr3: 43525201-43535200 Medicago truncatula
Medtr3g095260 10.0kb downstream 10.0kb downstream 14719 true chr3: 43535201-43549919 Medicago truncatula
Medtr3g095260 10.0kb downstream 10.0kb downstream 10000 false chr3: 43539920-43549919 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310078 5265 Fabidae View MSA
124072183 5270 Rosid View MSA
123752020 5271 Pentapetalae View MSA
122793375 5272 Eudicot View MSA
122050157 5273 Angiosperm View MSA
121346602 5274 Embryophyte View MSA
123428727 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.21        
cufflinks 2.521       Low
cufflinks 2.595       Low
cufflinks 5.334        
cufflinks 4.384        
cufflinks 5.537        
cufflinks 7.473       High
cufflinks 2.611       Low
cufflinks 5.627        

0 Strain