Gene : Medtr3g095070 M. truncatula Mt4.0v1
Defline:  (1 of 18) PF13371 - Tetratricopeptide repeat (TPR_9) Description:  TPR superfamily protein
Genomic Order:  5108 Name:  ? Medtr3g095070
Secondary Identifier:  ? PAC:31057783
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g095070 0.5kb upstream 0.5kb upstream 3397 true chr3: 43395888-43399284 Medicago truncatula
Medtr3g095070 0.5kb upstream 0.5kb upstream 500 false chr3: 43398785-43399284 Medicago truncatula
Medtr3g095070 0.5kb downstream 0.5kb downstream 3397 true chr3: 43395388-43398784 Medicago truncatula
Medtr3g095070 0.5kb downstream 0.5kb downstream 500 false chr3: 43395388-43395887 Medicago truncatula
Medtr3g095070 1.0kb upstream 1.0kb upstream 3897 true chr3: 43395888-43399784 Medicago truncatula
Medtr3g095070 1.0kb upstream 1.0kb upstream 1000 false chr3: 43398785-43399784 Medicago truncatula
Medtr3g095070 1.0kb downstream 1.0kb downstream 3897 true chr3: 43394888-43398784 Medicago truncatula
Medtr3g095070 1.0kb downstream 1.0kb downstream 1000 false chr3: 43394888-43395887 Medicago truncatula
Medtr3g095070 2.0kb upstream 2.0kb upstream 4897 true chr3: 43395888-43400784 Medicago truncatula
Medtr3g095070 2.0kb upstream 2.0kb upstream 2000 false chr3: 43398785-43400784 Medicago truncatula
Medtr3g095070 2.0kb downstream 2.0kb downstream 4897 true chr3: 43393888-43398784 Medicago truncatula
Medtr3g095070 2.0kb downstream 2.0kb downstream 2000 false chr3: 43393888-43395887 Medicago truncatula
Medtr3g095070 5.0kb upstream 5.0kb upstream 7897 true chr3: 43395888-43403784 Medicago truncatula
Medtr3g095070 5.0kb upstream 5.0kb upstream 5000 false chr3: 43398785-43403784 Medicago truncatula
Medtr3g095070 5.0kb downstream 5.0kb downstream 7897 true chr3: 43390888-43398784 Medicago truncatula
Medtr3g095070 5.0kb downstream 5.0kb downstream 5000 false chr3: 43390888-43395887 Medicago truncatula
Medtr3g095070 10.0kb upstream 10.0kb upstream 12897 true chr3: 43395888-43408784 Medicago truncatula
Medtr3g095070 10.0kb upstream 10.0kb upstream 10000 false chr3: 43398785-43408784 Medicago truncatula
Medtr3g095070 10.0kb downstream 10.0kb downstream 12897 true chr3: 43385888-43398784 Medicago truncatula
Medtr3g095070 10.0kb downstream 10.0kb downstream 10000 false chr3: 43385888-43395887 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303198 5265 Fabidae View MSA
124065454 5270 Rosid View MSA
123736679 5271 Pentapetalae View MSA
122790556 5272 Eudicot View MSA
122050724 5273 Angiosperm View MSA
121348352 5274 Embryophyte View MSA
123426406 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.27       Low
cufflinks 2.327        
cufflinks 2.841        
cufflinks 0.62        
cufflinks 3.947       High
cufflinks 0.169       Low
cufflinks 0.619        
cufflinks 2.379        
cufflinks 0.418        

0 Strain