Gene : Medtr3g096240 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23240//PTHR23240:SF11 - DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED Description:  DNA repair metallo-beta-lactamase family protein
Genomic Order:  5183 Name:  ? Medtr3g096240
Secondary Identifier:  ? PAC:31057495
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g096240 0.5kb upstream 0.5kb upstream 4080 true chr3: 43986416-43990495 Medicago truncatula
Medtr3g096240 0.5kb upstream 0.5kb upstream 500 false chr3: 43986416-43986915 Medicago truncatula
Medtr3g096240 0.5kb downstream 0.5kb downstream 4080 true chr3: 43986916-43990995 Medicago truncatula
Medtr3g096240 0.5kb downstream 0.5kb downstream 500 false chr3: 43990496-43990995 Medicago truncatula
Medtr3g096240 1.0kb upstream 1.0kb upstream 4580 true chr3: 43985916-43990495 Medicago truncatula
Medtr3g096240 1.0kb upstream 1.0kb upstream 1000 false chr3: 43985916-43986915 Medicago truncatula
Medtr3g096240 1.0kb downstream 1.0kb downstream 4580 true chr3: 43986916-43991495 Medicago truncatula
Medtr3g096240 1.0kb downstream 1.0kb downstream 1000 false chr3: 43990496-43991495 Medicago truncatula
Medtr3g096240 2.0kb upstream 2.0kb upstream 5580 true chr3: 43984916-43990495 Medicago truncatula
Medtr3g096240 2.0kb upstream 2.0kb upstream 2000 false chr3: 43984916-43986915 Medicago truncatula
Medtr3g096240 2.0kb downstream 2.0kb downstream 5580 true chr3: 43986916-43992495 Medicago truncatula
Medtr3g096240 2.0kb downstream 2.0kb downstream 2000 false chr3: 43990496-43992495 Medicago truncatula
Medtr3g096240 5.0kb upstream 5.0kb upstream 8580 true chr3: 43981916-43990495 Medicago truncatula
Medtr3g096240 5.0kb upstream 5.0kb upstream 5000 false chr3: 43981916-43986915 Medicago truncatula
Medtr3g096240 5.0kb downstream 5.0kb downstream 8580 true chr3: 43986916-43995495 Medicago truncatula
Medtr3g096240 5.0kb downstream 5.0kb downstream 5000 false chr3: 43990496-43995495 Medicago truncatula
Medtr3g096240 10.0kb upstream 10.0kb upstream 13580 true chr3: 43976916-43990495 Medicago truncatula
Medtr3g096240 10.0kb upstream 10.0kb upstream 10000 false chr3: 43976916-43986915 Medicago truncatula
Medtr3g096240 10.0kb downstream 10.0kb downstream 13580 true chr3: 43986916-44000495 Medicago truncatula
Medtr3g096240 10.0kb downstream 10.0kb downstream 10000 false chr3: 43990496-44000495 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314448 5265 Fabidae View MSA
124068668 5270 Rosid View MSA
123740105 5271 Pentapetalae View MSA
122792386 5272 Eudicot View MSA
122043083 5273 Angiosperm View MSA
121351448 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.349        
cufflinks 2.065        
cufflinks 1.456        
cufflinks 1.385        
cufflinks 1.698        
cufflinks 0.898       Low
cufflinks 1.695        
cufflinks 0.969       Low
cufflinks 3.35       High

0 Strain