Gene : Medtr3g096000 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23076:SF49 - AAA-TYPE ATPASE FAMILY PROTEIN Description:  ATP-dependent zinc metalloprotease FTSH-like protein
Genomic Order:  5169 Name:  ? Medtr3g096000
Secondary Identifier:  ? PAC:31054946
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g096000 0.5kb upstream 0.5kb upstream 11623 true chr3: 43865403-43877025 Medicago truncatula
Medtr3g096000 0.5kb upstream 0.5kb upstream 500 false chr3: 43876526-43877025 Medicago truncatula
Medtr3g096000 0.5kb downstream 0.5kb downstream 11623 true chr3: 43864903-43876525 Medicago truncatula
Medtr3g096000 0.5kb downstream 0.5kb downstream 500 false chr3: 43864903-43865402 Medicago truncatula
Medtr3g096000 1.0kb upstream 1.0kb upstream 12123 true chr3: 43865403-43877525 Medicago truncatula
Medtr3g096000 1.0kb upstream 1.0kb upstream 1000 false chr3: 43876526-43877525 Medicago truncatula
Medtr3g096000 1.0kb downstream 1.0kb downstream 12123 true chr3: 43864403-43876525 Medicago truncatula
Medtr3g096000 1.0kb downstream 1.0kb downstream 1000 false chr3: 43864403-43865402 Medicago truncatula
Medtr3g096000 2.0kb upstream 2.0kb upstream 13123 true chr3: 43865403-43878525 Medicago truncatula
Medtr3g096000 2.0kb upstream 2.0kb upstream 2000 false chr3: 43876526-43878525 Medicago truncatula
Medtr3g096000 2.0kb downstream 2.0kb downstream 13123 true chr3: 43863403-43876525 Medicago truncatula
Medtr3g096000 2.0kb downstream 2.0kb downstream 2000 false chr3: 43863403-43865402 Medicago truncatula
Medtr3g096000 5.0kb upstream 5.0kb upstream 16123 true chr3: 43865403-43881525 Medicago truncatula
Medtr3g096000 5.0kb upstream 5.0kb upstream 5000 false chr3: 43876526-43881525 Medicago truncatula
Medtr3g096000 5.0kb downstream 5.0kb downstream 16123 true chr3: 43860403-43876525 Medicago truncatula
Medtr3g096000 5.0kb downstream 5.0kb downstream 5000 false chr3: 43860403-43865402 Medicago truncatula
Medtr3g096000 10.0kb upstream 10.0kb upstream 21123 true chr3: 43865403-43886525 Medicago truncatula
Medtr3g096000 10.0kb upstream 10.0kb upstream 10000 false chr3: 43876526-43886525 Medicago truncatula
Medtr3g096000 10.0kb downstream 10.0kb downstream 21123 true chr3: 43855403-43876525 Medicago truncatula
Medtr3g096000 10.0kb downstream 10.0kb downstream 10000 false chr3: 43855403-43865402 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302710 5265 Fabidae View MSA
124066007 5270 Rosid View MSA
123738416 5271 Pentapetalae View MSA
122790727 5272 Eudicot View MSA
122043853 5273 Angiosperm View MSA
121345104 5274 Embryophyte View MSA
123380156 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.613        
cufflinks 2.065        
cufflinks 3.319        
cufflinks 0.205        
cufflinks 4.583       High
cufflinks 0.059     Low Low
cufflinks 0.348        
cufflinks 3.11        
cufflinks 0.481        

0 Strain