Gene : Medtr3g096370 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22849//PTHR22849:SF34 - WDSAM1 PROTEIN Description:  E3 ubiquitin ligase PUB14
Genomic Order:  5196 Name:  ? Medtr3g096370
Secondary Identifier:  ? PAC:31060866
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7511 Medicago truncatula pathologic  

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g096370 0.5kb upstream 0.5kb upstream 2484 true chr3: 44048758-44051241 Medicago truncatula
Medtr3g096370 0.5kb upstream 0.5kb upstream 500 false chr3: 44050742-44051241 Medicago truncatula
Medtr3g096370 0.5kb downstream 0.5kb downstream 2484 true chr3: 44048258-44050741 Medicago truncatula
Medtr3g096370 0.5kb downstream 0.5kb downstream 500 false chr3: 44048258-44048757 Medicago truncatula
Medtr3g096370 1.0kb upstream 1.0kb upstream 2984 true chr3: 44048758-44051741 Medicago truncatula
Medtr3g096370 1.0kb upstream 1.0kb upstream 1000 false chr3: 44050742-44051741 Medicago truncatula
Medtr3g096370 1.0kb downstream 1.0kb downstream 2984 true chr3: 44047758-44050741 Medicago truncatula
Medtr3g096370 1.0kb downstream 1.0kb downstream 1000 false chr3: 44047758-44048757 Medicago truncatula
Medtr3g096370 2.0kb upstream 2.0kb upstream 3984 true chr3: 44048758-44052741 Medicago truncatula
Medtr3g096370 2.0kb upstream 2.0kb upstream 2000 false chr3: 44050742-44052741 Medicago truncatula
Medtr3g096370 2.0kb downstream 2.0kb downstream 3984 true chr3: 44046758-44050741 Medicago truncatula
Medtr3g096370 2.0kb downstream 2.0kb downstream 2000 false chr3: 44046758-44048757 Medicago truncatula
Medtr3g096370 5.0kb upstream 5.0kb upstream 6984 true chr3: 44048758-44055741 Medicago truncatula
Medtr3g096370 5.0kb upstream 5.0kb upstream 5000 false chr3: 44050742-44055741 Medicago truncatula
Medtr3g096370 5.0kb downstream 5.0kb downstream 6984 true chr3: 44043758-44050741 Medicago truncatula
Medtr3g096370 5.0kb downstream 5.0kb downstream 5000 false chr3: 44043758-44048757 Medicago truncatula
Medtr3g096370 10.0kb upstream 10.0kb upstream 11984 true chr3: 44048758-44060741 Medicago truncatula
Medtr3g096370 10.0kb upstream 10.0kb upstream 10000 false chr3: 44050742-44060741 Medicago truncatula
Medtr3g096370 10.0kb downstream 10.0kb downstream 11984 true chr3: 44038758-44050741 Medicago truncatula
Medtr3g096370 10.0kb downstream 10.0kb downstream 10000 false chr3: 44038758-44048757 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308708 5265 Fabidae View MSA
124070063 5270 Rosid View MSA
123742248 5271 Pentapetalae View MSA
122794681 5272 Eudicot View MSA
122048666 5273 Angiosperm View MSA
121311065 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.316       Low
cufflinks 0.83        
cufflinks 2.155       High
cufflinks 0.366        
cufflinks 2.742       High
cufflinks 0.643        
cufflinks 0.639        
cufflinks 0.881        
cufflinks 0.39        

0 Strain