Gene : Medtr3g096290 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF11910 - Cyanobacterial and plant NDH-1 subunit O (NdhO) Description:  cyanobacterial and plant NDH-1 subunit O
Genomic Order:  5187 Name:  ? Medtr3g096290
Secondary Identifier:  ? PAC:31060566
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g096290 0.5kb upstream 0.5kb upstream 1683 true chr3: 44004783-44006465 Medicago truncatula
Medtr3g096290 0.5kb upstream 0.5kb upstream 500 false chr3: 44005966-44006465 Medicago truncatula
Medtr3g096290 0.5kb downstream 0.5kb downstream 1683 true chr3: 44004283-44005965 Medicago truncatula
Medtr3g096290 0.5kb downstream 0.5kb downstream 500 false chr3: 44004283-44004782 Medicago truncatula
Medtr3g096290 1.0kb upstream 1.0kb upstream 2183 true chr3: 44004783-44006965 Medicago truncatula
Medtr3g096290 1.0kb upstream 1.0kb upstream 1000 false chr3: 44005966-44006965 Medicago truncatula
Medtr3g096290 1.0kb downstream 1.0kb downstream 2183 true chr3: 44003783-44005965 Medicago truncatula
Medtr3g096290 1.0kb downstream 1.0kb downstream 1000 false chr3: 44003783-44004782 Medicago truncatula
Medtr3g096290 2.0kb upstream 2.0kb upstream 3183 true chr3: 44004783-44007965 Medicago truncatula
Medtr3g096290 2.0kb upstream 2.0kb upstream 2000 false chr3: 44005966-44007965 Medicago truncatula
Medtr3g096290 2.0kb downstream 2.0kb downstream 3183 true chr3: 44002783-44005965 Medicago truncatula
Medtr3g096290 2.0kb downstream 2.0kb downstream 2000 false chr3: 44002783-44004782 Medicago truncatula
Medtr3g096290 5.0kb upstream 5.0kb upstream 6183 true chr3: 44004783-44010965 Medicago truncatula
Medtr3g096290 5.0kb upstream 5.0kb upstream 5000 false chr3: 44005966-44010965 Medicago truncatula
Medtr3g096290 5.0kb downstream 5.0kb downstream 6183 true chr3: 43999783-44005965 Medicago truncatula
Medtr3g096290 5.0kb downstream 5.0kb downstream 5000 false chr3: 43999783-44004782 Medicago truncatula
Medtr3g096290 10.0kb upstream 10.0kb upstream 11183 true chr3: 44004783-44015965 Medicago truncatula
Medtr3g096290 10.0kb upstream 10.0kb upstream 10000 false chr3: 44005966-44015965 Medicago truncatula
Medtr3g096290 10.0kb downstream 10.0kb downstream 11183 true chr3: 43994783-44005965 Medicago truncatula
Medtr3g096290 10.0kb downstream 10.0kb downstream 10000 false chr3: 43994783-44004782 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303766 5265 Fabidae View MSA
124061930 5270 Rosid View MSA
123740594 5271 Pentapetalae View MSA
122785739 5272 Eudicot View MSA
122043742 5273 Angiosperm View MSA
121347549 5274 Embryophyte View MSA
123380569 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 22.199     High  
cufflinks 11.814     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 20.512     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 17.584     High  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain