Gene : Medtr3g096780 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR22870//PTHR22870:SF193 - REGULATOR OF CHROMOSOME CONDENSATION Description:  chromosome condensation regulator RCC1 repeat protein
Genomic Order:  5233 Name:  ? Medtr3g096780
Secondary Identifier:  ? PAC:31060178
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g096780 0.5kb upstream 0.5kb upstream 7683 true chr3: 44288776-44296458 Medicago truncatula
Medtr3g096780 0.5kb upstream 0.5kb upstream 500 false chr3: 44288776-44289275 Medicago truncatula
Medtr3g096780 0.5kb downstream 0.5kb downstream 7683 true chr3: 44289276-44296958 Medicago truncatula
Medtr3g096780 0.5kb downstream 0.5kb downstream 500 false chr3: 44296459-44296958 Medicago truncatula
Medtr3g096780 1.0kb upstream 1.0kb upstream 8183 true chr3: 44288276-44296458 Medicago truncatula
Medtr3g096780 1.0kb upstream 1.0kb upstream 1000 false chr3: 44288276-44289275 Medicago truncatula
Medtr3g096780 1.0kb downstream 1.0kb downstream 8183 true chr3: 44289276-44297458 Medicago truncatula
Medtr3g096780 1.0kb downstream 1.0kb downstream 1000 false chr3: 44296459-44297458 Medicago truncatula
Medtr3g096780 2.0kb upstream 2.0kb upstream 9183 true chr3: 44287276-44296458 Medicago truncatula
Medtr3g096780 2.0kb upstream 2.0kb upstream 2000 false chr3: 44287276-44289275 Medicago truncatula
Medtr3g096780 2.0kb downstream 2.0kb downstream 9183 true chr3: 44289276-44298458 Medicago truncatula
Medtr3g096780 2.0kb downstream 2.0kb downstream 2000 false chr3: 44296459-44298458 Medicago truncatula
Medtr3g096780 5.0kb upstream 5.0kb upstream 12183 true chr3: 44284276-44296458 Medicago truncatula
Medtr3g096780 5.0kb upstream 5.0kb upstream 5000 false chr3: 44284276-44289275 Medicago truncatula
Medtr3g096780 5.0kb downstream 5.0kb downstream 12183 true chr3: 44289276-44301458 Medicago truncatula
Medtr3g096780 5.0kb downstream 5.0kb downstream 5000 false chr3: 44296459-44301458 Medicago truncatula
Medtr3g096780 10.0kb upstream 10.0kb upstream 17183 true chr3: 44279276-44296458 Medicago truncatula
Medtr3g096780 10.0kb upstream 10.0kb upstream 10000 false chr3: 44279276-44289275 Medicago truncatula
Medtr3g096780 10.0kb downstream 10.0kb downstream 17183 true chr3: 44289276-44306458 Medicago truncatula
Medtr3g096780 10.0kb downstream 10.0kb downstream 10000 false chr3: 44296459-44306458 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307627 5265 Fabidae View MSA
124066252 5270 Rosid View MSA
123750036 5271 Pentapetalae View MSA
122789173 5272 Eudicot View MSA
122046022 5273 Angiosperm View MSA
121348497 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.586       Low
cufflinks 7.799       High
cufflinks 5.103        
cufflinks 1.102        
cufflinks 8.179       High
cufflinks 0.528       Low
cufflinks 1.534        
cufflinks 5.424        
cufflinks 3.054        

0 Strain