Gene : Medtr3g097420 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR33147:SF3 - DEFENSIN-LIKE PROTEIN 6 Description:  Defensin
Genomic Order:  5278 Name:  ? Medtr3g097420
Secondary Identifier:  ? PAC:31057050
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g097420 0.5kb upstream 0.5kb upstream 1225 true chr3: 44660326-44661550 Medicago truncatula
Medtr3g097420 0.5kb upstream 0.5kb upstream 500 false chr3: 44660326-44660825 Medicago truncatula
Medtr3g097420 0.5kb downstream 0.5kb downstream 1225 true chr3: 44660826-44662050 Medicago truncatula
Medtr3g097420 0.5kb downstream 0.5kb downstream 500 false chr3: 44661551-44662050 Medicago truncatula
Medtr3g097420 1.0kb upstream 1.0kb upstream 1725 true chr3: 44659826-44661550 Medicago truncatula
Medtr3g097420 1.0kb upstream 1.0kb upstream 1000 false chr3: 44659826-44660825 Medicago truncatula
Medtr3g097420 1.0kb downstream 1.0kb downstream 1725 true chr3: 44660826-44662550 Medicago truncatula
Medtr3g097420 1.0kb downstream 1.0kb downstream 1000 false chr3: 44661551-44662550 Medicago truncatula
Medtr3g097420 2.0kb upstream 2.0kb upstream 2725 true chr3: 44658826-44661550 Medicago truncatula
Medtr3g097420 2.0kb upstream 2.0kb upstream 2000 false chr3: 44658826-44660825 Medicago truncatula
Medtr3g097420 2.0kb downstream 2.0kb downstream 2725 true chr3: 44660826-44663550 Medicago truncatula
Medtr3g097420 2.0kb downstream 2.0kb downstream 2000 false chr3: 44661551-44663550 Medicago truncatula
Medtr3g097420 5.0kb upstream 5.0kb upstream 5725 true chr3: 44655826-44661550 Medicago truncatula
Medtr3g097420 5.0kb upstream 5.0kb upstream 5000 false chr3: 44655826-44660825 Medicago truncatula
Medtr3g097420 5.0kb downstream 5.0kb downstream 5725 true chr3: 44660826-44666550 Medicago truncatula
Medtr3g097420 5.0kb downstream 5.0kb downstream 5000 false chr3: 44661551-44666550 Medicago truncatula
Medtr3g097420 10.0kb upstream 10.0kb upstream 10725 true chr3: 44650826-44661550 Medicago truncatula
Medtr3g097420 10.0kb upstream 10.0kb upstream 10000 false chr3: 44650826-44660825 Medicago truncatula
Medtr3g097420 10.0kb downstream 10.0kb downstream 10725 true chr3: 44660826-44671550 Medicago truncatula
Medtr3g097420 10.0kb downstream 10.0kb downstream 10000 false chr3: 44661551-44671550 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029096 5273 Angiosperm View MSA
122296962 5265 Fabidae View MSA
124066423 5270 Rosid View MSA
123752741 5271 Pentapetalae View MSA
122796765 5272 Eudicot View MSA
121298492 5274 Embryophyte View MSA
123336463 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.026     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 7.789        
cufflinks 0.014     Low Low
cufflinks 38.753     High High
cufflinks 8.389        
cufflinks 0.03     Low  
cufflinks 17.884     High  

0 Strain