Gene : Medtr3g097270 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF00169//PF01237 - PH domain (PH) // Oxysterol-binding protein (Oxysterol_BP) Description:  OSBP(oxysterol-binding protein)-related protein 1C
Genomic Order:  5269 Name:  ? Medtr3g097270
Secondary Identifier:  ? PAC:31056910
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g097270 0.5kb upstream 0.5kb upstream 4529 true chr3: 44603505-44608033 Medicago truncatula
Medtr3g097270 0.5kb upstream 0.5kb upstream 500 false chr3: 44607534-44608033 Medicago truncatula
Medtr3g097270 0.5kb downstream 0.5kb downstream 4529 true chr3: 44603005-44607533 Medicago truncatula
Medtr3g097270 0.5kb downstream 0.5kb downstream 500 false chr3: 44603005-44603504 Medicago truncatula
Medtr3g097270 1.0kb upstream 1.0kb upstream 5029 true chr3: 44603505-44608533 Medicago truncatula
Medtr3g097270 1.0kb upstream 1.0kb upstream 1000 false chr3: 44607534-44608533 Medicago truncatula
Medtr3g097270 1.0kb downstream 1.0kb downstream 5029 true chr3: 44602505-44607533 Medicago truncatula
Medtr3g097270 1.0kb downstream 1.0kb downstream 1000 false chr3: 44602505-44603504 Medicago truncatula
Medtr3g097270 2.0kb upstream 2.0kb upstream 6029 true chr3: 44603505-44609533 Medicago truncatula
Medtr3g097270 2.0kb upstream 2.0kb upstream 2000 false chr3: 44607534-44609533 Medicago truncatula
Medtr3g097270 2.0kb downstream 2.0kb downstream 6029 true chr3: 44601505-44607533 Medicago truncatula
Medtr3g097270 2.0kb downstream 2.0kb downstream 2000 false chr3: 44601505-44603504 Medicago truncatula
Medtr3g097270 5.0kb upstream 5.0kb upstream 9029 true chr3: 44603505-44612533 Medicago truncatula
Medtr3g097270 5.0kb upstream 5.0kb upstream 5000 false chr3: 44607534-44612533 Medicago truncatula
Medtr3g097270 5.0kb downstream 5.0kb downstream 9029 true chr3: 44598505-44607533 Medicago truncatula
Medtr3g097270 5.0kb downstream 5.0kb downstream 5000 false chr3: 44598505-44603504 Medicago truncatula
Medtr3g097270 10.0kb upstream 10.0kb upstream 14029 true chr3: 44603505-44617533 Medicago truncatula
Medtr3g097270 10.0kb upstream 10.0kb upstream 10000 false chr3: 44607534-44617533 Medicago truncatula
Medtr3g097270 10.0kb downstream 10.0kb downstream 14029 true chr3: 44593505-44607533 Medicago truncatula
Medtr3g097270 10.0kb downstream 10.0kb downstream 10000 false chr3: 44593505-44603504 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041393 5273 Angiosperm View MSA
122297387 5265 Fabidae View MSA
124036009 5270 Rosid View MSA
123750665 5271 Pentapetalae View MSA
122795598 5272 Eudicot View MSA
121348669 5274 Embryophyte View MSA
123428535 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.061     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain