Gene : Medtr3g098180 M. truncatula Mt4.0v1
Defline:  (1 of 7) PTHR21660:SF6 - F19P19.27 PROTEIN Description:  acyl-coenzyme A thioesterase-like protein
Genomic Order:  5297 Name:  ? Medtr3g098180
Secondary Identifier:  ? PAC:31057068
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-1121 Medicago truncatula pathologic  
Mtruncatula PWY-321 Medicago truncatula pathologic  
Mtruncatula PWY-5148 Medicago truncatula pathologic  
Mtruncatula PWY-6733 Medicago truncatula pathologic  
Mtruncatula PWY-735 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g098180 0.5kb upstream 0.5kb upstream 2651 true chr3: 44803784-44806434 Medicago truncatula
Medtr3g098180 0.5kb upstream 0.5kb upstream 500 false chr3: 44805935-44806434 Medicago truncatula
Medtr3g098180 0.5kb downstream 0.5kb downstream 2651 true chr3: 44803284-44805934 Medicago truncatula
Medtr3g098180 0.5kb downstream 0.5kb downstream 500 false chr3: 44803284-44803783 Medicago truncatula
Medtr3g098180 1.0kb upstream 1.0kb upstream 3151 true chr3: 44803784-44806934 Medicago truncatula
Medtr3g098180 1.0kb upstream 1.0kb upstream 1000 false chr3: 44805935-44806934 Medicago truncatula
Medtr3g098180 1.0kb downstream 1.0kb downstream 3151 true chr3: 44802784-44805934 Medicago truncatula
Medtr3g098180 1.0kb downstream 1.0kb downstream 1000 false chr3: 44802784-44803783 Medicago truncatula
Medtr3g098180 2.0kb upstream 2.0kb upstream 4151 true chr3: 44803784-44807934 Medicago truncatula
Medtr3g098180 2.0kb upstream 2.0kb upstream 2000 false chr3: 44805935-44807934 Medicago truncatula
Medtr3g098180 2.0kb downstream 2.0kb downstream 4151 true chr3: 44801784-44805934 Medicago truncatula
Medtr3g098180 2.0kb downstream 2.0kb downstream 2000 false chr3: 44801784-44803783 Medicago truncatula
Medtr3g098180 5.0kb upstream 5.0kb upstream 7151 true chr3: 44803784-44810934 Medicago truncatula
Medtr3g098180 5.0kb upstream 5.0kb upstream 5000 false chr3: 44805935-44810934 Medicago truncatula
Medtr3g098180 5.0kb downstream 5.0kb downstream 7151 true chr3: 44798784-44805934 Medicago truncatula
Medtr3g098180 5.0kb downstream 5.0kb downstream 5000 false chr3: 44798784-44803783 Medicago truncatula
Medtr3g098180 10.0kb upstream 10.0kb upstream 12151 true chr3: 44803784-44815934 Medicago truncatula
Medtr3g098180 10.0kb upstream 10.0kb upstream 10000 false chr3: 44805935-44815934 Medicago truncatula
Medtr3g098180 10.0kb downstream 10.0kb downstream 12151 true chr3: 44793784-44805934 Medicago truncatula
Medtr3g098180 10.0kb downstream 10.0kb downstream 10000 false chr3: 44793784-44803783 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295755 5265 Fabidae View MSA
124063783 5270 Rosid View MSA
123750481 5271 Pentapetalae View MSA
122787184 5272 Eudicot View MSA
122043705 5273 Angiosperm View MSA
121345326 5274 Embryophyte View MSA
123428627 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain