Gene : Medtr3g098290 M. truncatula Mt4.0v1
Defline:  (1 of 42) PF07899 - Frigida-like protein (Frigida) Description:  frigida-LIKE protein
Genomic Order:  5307 Name:  ? Medtr3g098290
Secondary Identifier:  ? PAC:31058730
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g098290 0.5kb upstream 0.5kb upstream 5075 true chr3: 44862196-44867270 Medicago truncatula
Medtr3g098290 0.5kb upstream 0.5kb upstream 500 false chr3: 44866771-44867270 Medicago truncatula
Medtr3g098290 0.5kb downstream 0.5kb downstream 5075 true chr3: 44861696-44866770 Medicago truncatula
Medtr3g098290 0.5kb downstream 0.5kb downstream 500 false chr3: 44861696-44862195 Medicago truncatula
Medtr3g098290 1.0kb upstream 1.0kb upstream 5575 true chr3: 44862196-44867770 Medicago truncatula
Medtr3g098290 1.0kb upstream 1.0kb upstream 1000 false chr3: 44866771-44867770 Medicago truncatula
Medtr3g098290 1.0kb downstream 1.0kb downstream 5575 true chr3: 44861196-44866770 Medicago truncatula
Medtr3g098290 1.0kb downstream 1.0kb downstream 1000 false chr3: 44861196-44862195 Medicago truncatula
Medtr3g098290 2.0kb upstream 2.0kb upstream 6575 true chr3: 44862196-44868770 Medicago truncatula
Medtr3g098290 2.0kb upstream 2.0kb upstream 2000 false chr3: 44866771-44868770 Medicago truncatula
Medtr3g098290 2.0kb downstream 2.0kb downstream 6575 true chr3: 44860196-44866770 Medicago truncatula
Medtr3g098290 2.0kb downstream 2.0kb downstream 2000 false chr3: 44860196-44862195 Medicago truncatula
Medtr3g098290 5.0kb upstream 5.0kb upstream 9575 true chr3: 44862196-44871770 Medicago truncatula
Medtr3g098290 5.0kb upstream 5.0kb upstream 5000 false chr3: 44866771-44871770 Medicago truncatula
Medtr3g098290 5.0kb downstream 5.0kb downstream 9575 true chr3: 44857196-44866770 Medicago truncatula
Medtr3g098290 5.0kb downstream 5.0kb downstream 5000 false chr3: 44857196-44862195 Medicago truncatula
Medtr3g098290 10.0kb upstream 10.0kb upstream 14575 true chr3: 44862196-44876770 Medicago truncatula
Medtr3g098290 10.0kb upstream 10.0kb upstream 10000 false chr3: 44866771-44876770 Medicago truncatula
Medtr3g098290 10.0kb downstream 10.0kb downstream 14575 true chr3: 44852196-44866770 Medicago truncatula
Medtr3g098290 10.0kb downstream 10.0kb downstream 10000 false chr3: 44852196-44862195 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297571 5265 Fabidae View MSA
124068332 5270 Rosid View MSA
123746109 5271 Pentapetalae View MSA
122785719 5272 Eudicot View MSA
122043307 5273 Angiosperm View MSA
121310105 5274 Embryophyte View MSA
123347687 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.745       High
cufflinks 1.37        
cufflinks 1.459        
cufflinks 0.595        
cufflinks 2.028        
cufflinks 0.235       Low
cufflinks 0.83        
cufflinks 1.127        
cufflinks 1.09        

0 Strain