Gene : Medtr3g089010 M. truncatula Mt4.0v1
Defline:  (1 of 1) 5.5.1.9 - Cycloeucalenol cycloisomerase / Cycloeucalenol--obtusifoliol isomerase Description:  cycloeucalenol cycloisomerase
Genomic Order:  3795 Name:  ? Medtr3g089010
Secondary Identifier:  ? PAC:31056005
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-2541 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g089010 0.5kb upstream 0.5kb upstream 5260 true chr3: 33968687-33973946 Medicago truncatula
Medtr3g089010 0.5kb upstream 0.5kb upstream 500 false chr3: 33973447-33973946 Medicago truncatula
Medtr3g089010 0.5kb downstream 0.5kb downstream 5260 true chr3: 33968187-33973446 Medicago truncatula
Medtr3g089010 0.5kb downstream 0.5kb downstream 500 false chr3: 33968187-33968686 Medicago truncatula
Medtr3g089010 1.0kb upstream 1.0kb upstream 5760 true chr3: 33968687-33974446 Medicago truncatula
Medtr3g089010 1.0kb upstream 1.0kb upstream 1000 false chr3: 33973447-33974446 Medicago truncatula
Medtr3g089010 1.0kb downstream 1.0kb downstream 5760 true chr3: 33967687-33973446 Medicago truncatula
Medtr3g089010 1.0kb downstream 1.0kb downstream 1000 false chr3: 33967687-33968686 Medicago truncatula
Medtr3g089010 2.0kb upstream 2.0kb upstream 6760 true chr3: 33968687-33975446 Medicago truncatula
Medtr3g089010 2.0kb upstream 2.0kb upstream 2000 false chr3: 33973447-33975446 Medicago truncatula
Medtr3g089010 2.0kb downstream 2.0kb downstream 6760 true chr3: 33966687-33973446 Medicago truncatula
Medtr3g089010 2.0kb downstream 2.0kb downstream 2000 false chr3: 33966687-33968686 Medicago truncatula
Medtr3g089010 5.0kb upstream 5.0kb upstream 9760 true chr3: 33968687-33978446 Medicago truncatula
Medtr3g089010 5.0kb upstream 5.0kb upstream 5000 false chr3: 33973447-33978446 Medicago truncatula
Medtr3g089010 5.0kb downstream 5.0kb downstream 9760 true chr3: 33963687-33973446 Medicago truncatula
Medtr3g089010 5.0kb downstream 5.0kb downstream 5000 false chr3: 33963687-33968686 Medicago truncatula
Medtr3g089010 10.0kb upstream 10.0kb upstream 14760 true chr3: 33968687-33983446 Medicago truncatula
Medtr3g089010 10.0kb upstream 10.0kb upstream 10000 false chr3: 33973447-33983446 Medicago truncatula
Medtr3g089010 10.0kb downstream 10.0kb downstream 14760 true chr3: 33958687-33973446 Medicago truncatula
Medtr3g089010 10.0kb downstream 10.0kb downstream 10000 false chr3: 33958687-33968686 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300790 5265 Fabidae View MSA
124063919 5270 Rosid View MSA
123740858 5271 Pentapetalae View MSA
122788085 5272 Eudicot View MSA
122046906 5273 Angiosperm View MSA
121345110 5274 Embryophyte View MSA
123424971 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.243       Low
cufflinks 3.671        
cufflinks 4.363        
cufflinks 2.753        
cufflinks 5.184        
cufflinks 0.984        
cufflinks 2.202        
cufflinks 3.159        
cufflinks 3.892        

0 Strain