Gene : Medtr3g088865 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12642:SF0 - RIBOSOME BIOGENESIS PROTEIN NSA2 HOMOLOG Description:  ribosomal protein S8e family protein
Genomic Order:  4739 Name:  ? Medtr3g088865
Secondary Identifier:  ? PAC:31057257
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g088865 0.5kb upstream 0.5kb upstream 3571 true chr3: 40670252-40673822 Medicago truncatula
Medtr3g088865 0.5kb upstream 0.5kb upstream 500 false chr3: 40673323-40673822 Medicago truncatula
Medtr3g088865 0.5kb downstream 0.5kb downstream 3571 true chr3: 40669752-40673322 Medicago truncatula
Medtr3g088865 0.5kb downstream 0.5kb downstream 500 false chr3: 40669752-40670251 Medicago truncatula
Medtr3g088865 1.0kb upstream 1.0kb upstream 4071 true chr3: 40670252-40674322 Medicago truncatula
Medtr3g088865 1.0kb upstream 1.0kb upstream 1000 false chr3: 40673323-40674322 Medicago truncatula
Medtr3g088865 1.0kb downstream 1.0kb downstream 4071 true chr3: 40669252-40673322 Medicago truncatula
Medtr3g088865 1.0kb downstream 1.0kb downstream 1000 false chr3: 40669252-40670251 Medicago truncatula
Medtr3g088865 2.0kb upstream 2.0kb upstream 5071 true chr3: 40670252-40675322 Medicago truncatula
Medtr3g088865 2.0kb upstream 2.0kb upstream 2000 false chr3: 40673323-40675322 Medicago truncatula
Medtr3g088865 2.0kb downstream 2.0kb downstream 5071 true chr3: 40668252-40673322 Medicago truncatula
Medtr3g088865 2.0kb downstream 2.0kb downstream 2000 false chr3: 40668252-40670251 Medicago truncatula
Medtr3g088865 5.0kb upstream 5.0kb upstream 8071 true chr3: 40670252-40678322 Medicago truncatula
Medtr3g088865 5.0kb upstream 5.0kb upstream 5000 false chr3: 40673323-40678322 Medicago truncatula
Medtr3g088865 5.0kb downstream 5.0kb downstream 8071 true chr3: 40665252-40673322 Medicago truncatula
Medtr3g088865 5.0kb downstream 5.0kb downstream 5000 false chr3: 40665252-40670251 Medicago truncatula
Medtr3g088865 10.0kb upstream 10.0kb upstream 13071 true chr3: 40670252-40683322 Medicago truncatula
Medtr3g088865 10.0kb upstream 10.0kb upstream 10000 false chr3: 40673323-40683322 Medicago truncatula
Medtr3g088865 10.0kb downstream 10.0kb downstream 13071 true chr3: 40660252-40673322 Medicago truncatula
Medtr3g088865 10.0kb downstream 10.0kb downstream 10000 false chr3: 40660252-40670251 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312013 5265 Fabidae View MSA
124061580 5270 Rosid View MSA
123741663 5271 Pentapetalae View MSA
122796329 5272 Eudicot View MSA
122043464 5273 Angiosperm View MSA
121344863 5274 Embryophyte View MSA
123424224 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.205     High High
cufflinks 8.608        
cufflinks 13.478     High  
cufflinks 11.285     High  
cufflinks 10.136        
cufflinks 4.932       Low
cufflinks 8.71        
cufflinks 11.467     High  
cufflinks 11.49     High  

0 Strain