Gene : Medtr3g088945 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR23023:SF121 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA11-RELATED Description:  flavin containing monooxygenase YUCCA10-like protein
Genomic Order:  4744 Name:  ? Medtr3g088945
Secondary Identifier:  ? PAC:31056147
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWYDQC-4 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g088945 0.5kb upstream 0.5kb upstream 2497 true chr3: 40711436-40713932 Medicago truncatula
Medtr3g088945 0.5kb upstream 0.5kb upstream 500 false chr3: 40711436-40711935 Medicago truncatula
Medtr3g088945 0.5kb downstream 0.5kb downstream 2497 true chr3: 40711936-40714432 Medicago truncatula
Medtr3g088945 0.5kb downstream 0.5kb downstream 500 false chr3: 40713933-40714432 Medicago truncatula
Medtr3g088945 1.0kb upstream 1.0kb upstream 2997 true chr3: 40710936-40713932 Medicago truncatula
Medtr3g088945 1.0kb upstream 1.0kb upstream 1000 false chr3: 40710936-40711935 Medicago truncatula
Medtr3g088945 1.0kb downstream 1.0kb downstream 2997 true chr3: 40711936-40714932 Medicago truncatula
Medtr3g088945 1.0kb downstream 1.0kb downstream 1000 false chr3: 40713933-40714932 Medicago truncatula
Medtr3g088945 2.0kb upstream 2.0kb upstream 3997 true chr3: 40709936-40713932 Medicago truncatula
Medtr3g088945 2.0kb upstream 2.0kb upstream 2000 false chr3: 40709936-40711935 Medicago truncatula
Medtr3g088945 2.0kb downstream 2.0kb downstream 3997 true chr3: 40711936-40715932 Medicago truncatula
Medtr3g088945 2.0kb downstream 2.0kb downstream 2000 false chr3: 40713933-40715932 Medicago truncatula
Medtr3g088945 5.0kb upstream 5.0kb upstream 6997 true chr3: 40706936-40713932 Medicago truncatula
Medtr3g088945 5.0kb upstream 5.0kb upstream 5000 false chr3: 40706936-40711935 Medicago truncatula
Medtr3g088945 5.0kb downstream 5.0kb downstream 6997 true chr3: 40711936-40718932 Medicago truncatula
Medtr3g088945 5.0kb downstream 5.0kb downstream 5000 false chr3: 40713933-40718932 Medicago truncatula
Medtr3g088945 10.0kb upstream 10.0kb upstream 11997 true chr3: 40701936-40713932 Medicago truncatula
Medtr3g088945 10.0kb upstream 10.0kb upstream 10000 false chr3: 40701936-40711935 Medicago truncatula
Medtr3g088945 10.0kb downstream 10.0kb downstream 11997 true chr3: 40711936-40723932 Medicago truncatula
Medtr3g088945 10.0kb downstream 10.0kb downstream 10000 false chr3: 40713933-40723932 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301765 5265 Fabidae View MSA
124069751 5270 Rosid View MSA
123749752 5271 Pentapetalae View MSA
122794899 5272 Eudicot View MSA
122047342 5273 Angiosperm View MSA
121310731 5274 Embryophyte View MSA
123348144 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain