Gene : Medtr3g089940 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11695//PTHR11695:SF432 - ALCOHOL DEHYDROGENASE RELATED Description:  zinc-binding alcohol dehydrogenase family protein
Genomic Order:  4764 Name:  ? Medtr3g089940
Secondary Identifier:  ? PAC:31060588
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5486 Medicago truncatula pathologic  
Mtruncatula PWY-6313 Medicago truncatula pathologic  
Mtruncatula PWY-6333 Medicago truncatula pathologic  
Mtruncatula PWY66-21 Medicago truncatula pathologic  
Mtruncatula PWY66-389 Medicago truncatula pathologic  
Mtruncatula PWY-6802 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g089940 0.5kb upstream 0.5kb upstream 4355 true chr3: 40878191-40882545 Medicago truncatula
Medtr3g089940 0.5kb upstream 0.5kb upstream 500 false chr3: 40878191-40878690 Medicago truncatula
Medtr3g089940 0.5kb downstream 0.5kb downstream 4355 true chr3: 40878691-40883045 Medicago truncatula
Medtr3g089940 0.5kb downstream 0.5kb downstream 500 false chr3: 40882546-40883045 Medicago truncatula
Medtr3g089940 1.0kb upstream 1.0kb upstream 4855 true chr3: 40877691-40882545 Medicago truncatula
Medtr3g089940 1.0kb upstream 1.0kb upstream 1000 false chr3: 40877691-40878690 Medicago truncatula
Medtr3g089940 1.0kb downstream 1.0kb downstream 4855 true chr3: 40878691-40883545 Medicago truncatula
Medtr3g089940 1.0kb downstream 1.0kb downstream 1000 false chr3: 40882546-40883545 Medicago truncatula
Medtr3g089940 2.0kb upstream 2.0kb upstream 5855 true chr3: 40876691-40882545 Medicago truncatula
Medtr3g089940 2.0kb upstream 2.0kb upstream 2000 false chr3: 40876691-40878690 Medicago truncatula
Medtr3g089940 2.0kb downstream 2.0kb downstream 5855 true chr3: 40878691-40884545 Medicago truncatula
Medtr3g089940 2.0kb downstream 2.0kb downstream 2000 false chr3: 40882546-40884545 Medicago truncatula
Medtr3g089940 5.0kb upstream 5.0kb upstream 8855 true chr3: 40873691-40882545 Medicago truncatula
Medtr3g089940 5.0kb upstream 5.0kb upstream 5000 false chr3: 40873691-40878690 Medicago truncatula
Medtr3g089940 5.0kb downstream 5.0kb downstream 8855 true chr3: 40878691-40887545 Medicago truncatula
Medtr3g089940 5.0kb downstream 5.0kb downstream 5000 false chr3: 40882546-40887545 Medicago truncatula
Medtr3g089940 10.0kb upstream 10.0kb upstream 13855 true chr3: 40868691-40882545 Medicago truncatula
Medtr3g089940 10.0kb upstream 10.0kb upstream 10000 false chr3: 40868691-40878690 Medicago truncatula
Medtr3g089940 10.0kb downstream 10.0kb downstream 13855 true chr3: 40878691-40892545 Medicago truncatula
Medtr3g089940 10.0kb downstream 10.0kb downstream 10000 false chr3: 40882546-40892545 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310854 5265 Fabidae View MSA
124072794 5270 Rosid View MSA
123750363 5271 Pentapetalae View MSA
122796866 5272 Eudicot View MSA
122050713 5273 Angiosperm View MSA
121350624 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 351.394     High  
cufflinks 12.101     High  
cufflinks 14.483     High  
cufflinks 356.681     High  
cufflinks 2.474       Low
cufflinks 143.15     High  
cufflinks 448.74     High  
cufflinks 12.155     High  
cufflinks 327.761     High  

0 Strain