Gene : Medtr3g091190 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG4519 - Phosphomevalonate kinase Description:  phosphomevalonate kinase
Genomic Order:  4841 Name:  ? Medtr3g091190
Secondary Identifier:  ? PAC:31057587
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5910 Medicago truncatula pathologic  
Mtruncatula PWY-922 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g091190 0.5kb upstream 0.5kb upstream 5768 true chr3: 41448415-41454182 Medicago truncatula
Medtr3g091190 0.5kb upstream 0.5kb upstream 500 false chr3: 41453683-41454182 Medicago truncatula
Medtr3g091190 0.5kb downstream 0.5kb downstream 5768 true chr3: 41447915-41453682 Medicago truncatula
Medtr3g091190 0.5kb downstream 0.5kb downstream 500 false chr3: 41447915-41448414 Medicago truncatula
Medtr3g091190 1.0kb upstream 1.0kb upstream 6268 true chr3: 41448415-41454682 Medicago truncatula
Medtr3g091190 1.0kb upstream 1.0kb upstream 1000 false chr3: 41453683-41454682 Medicago truncatula
Medtr3g091190 1.0kb downstream 1.0kb downstream 6268 true chr3: 41447415-41453682 Medicago truncatula
Medtr3g091190 1.0kb downstream 1.0kb downstream 1000 false chr3: 41447415-41448414 Medicago truncatula
Medtr3g091190 2.0kb upstream 2.0kb upstream 7268 true chr3: 41448415-41455682 Medicago truncatula
Medtr3g091190 2.0kb upstream 2.0kb upstream 2000 false chr3: 41453683-41455682 Medicago truncatula
Medtr3g091190 2.0kb downstream 2.0kb downstream 7268 true chr3: 41446415-41453682 Medicago truncatula
Medtr3g091190 2.0kb downstream 2.0kb downstream 2000 false chr3: 41446415-41448414 Medicago truncatula
Medtr3g091190 5.0kb upstream 5.0kb upstream 10268 true chr3: 41448415-41458682 Medicago truncatula
Medtr3g091190 5.0kb upstream 5.0kb upstream 5000 false chr3: 41453683-41458682 Medicago truncatula
Medtr3g091190 5.0kb downstream 5.0kb downstream 10268 true chr3: 41443415-41453682 Medicago truncatula
Medtr3g091190 5.0kb downstream 5.0kb downstream 5000 false chr3: 41443415-41448414 Medicago truncatula
Medtr3g091190 10.0kb upstream 10.0kb upstream 15268 true chr3: 41448415-41463682 Medicago truncatula
Medtr3g091190 10.0kb upstream 10.0kb upstream 10000 false chr3: 41453683-41463682 Medicago truncatula
Medtr3g091190 10.0kb downstream 10.0kb downstream 15268 true chr3: 41438415-41453682 Medicago truncatula
Medtr3g091190 10.0kb downstream 10.0kb downstream 10000 false chr3: 41438415-41448414 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302119 5265 Fabidae View MSA
124060690 5270 Rosid View MSA
123748529 5271 Pentapetalae View MSA
122787383 5272 Eudicot View MSA
122043495 5273 Angiosperm View MSA
121345412 5274 Embryophyte View MSA
123380212 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.381        
cufflinks 5.553        
cufflinks 3.904        
cufflinks 2.774        
cufflinks 5.761        
cufflinks 1.491       Low
cufflinks 5.57        
cufflinks 3.633        
cufflinks 14.695     High High

0 Strain