Gene : Medtr3g091500 M. truncatula Mt4.0v1
Defline:  (1 of 210) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Description:  pentatricopeptide (PPR) repeat protein
Genomic Order:  4858 Name:  ? Medtr3g091500
Secondary Identifier:  ? PAC:31056205
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g091500 0.5kb upstream 0.5kb upstream 2970 true chr3: 41625215-41628184 Medicago truncatula
Medtr3g091500 0.5kb upstream 0.5kb upstream 500 false chr3: 41625215-41625714 Medicago truncatula
Medtr3g091500 0.5kb downstream 0.5kb downstream 2970 true chr3: 41625715-41628684 Medicago truncatula
Medtr3g091500 0.5kb downstream 0.5kb downstream 500 false chr3: 41628185-41628684 Medicago truncatula
Medtr3g091500 1.0kb upstream 1.0kb upstream 3470 true chr3: 41624715-41628184 Medicago truncatula
Medtr3g091500 1.0kb upstream 1.0kb upstream 1000 false chr3: 41624715-41625714 Medicago truncatula
Medtr3g091500 1.0kb downstream 1.0kb downstream 3470 true chr3: 41625715-41629184 Medicago truncatula
Medtr3g091500 1.0kb downstream 1.0kb downstream 1000 false chr3: 41628185-41629184 Medicago truncatula
Medtr3g091500 2.0kb upstream 2.0kb upstream 4470 true chr3: 41623715-41628184 Medicago truncatula
Medtr3g091500 2.0kb upstream 2.0kb upstream 2000 false chr3: 41623715-41625714 Medicago truncatula
Medtr3g091500 2.0kb downstream 2.0kb downstream 4470 true chr3: 41625715-41630184 Medicago truncatula
Medtr3g091500 2.0kb downstream 2.0kb downstream 2000 false chr3: 41628185-41630184 Medicago truncatula
Medtr3g091500 5.0kb upstream 5.0kb upstream 7470 true chr3: 41620715-41628184 Medicago truncatula
Medtr3g091500 5.0kb upstream 5.0kb upstream 5000 false chr3: 41620715-41625714 Medicago truncatula
Medtr3g091500 5.0kb downstream 5.0kb downstream 7470 true chr3: 41625715-41633184 Medicago truncatula
Medtr3g091500 5.0kb downstream 5.0kb downstream 5000 false chr3: 41628185-41633184 Medicago truncatula
Medtr3g091500 10.0kb upstream 10.0kb upstream 12470 true chr3: 41615715-41628184 Medicago truncatula
Medtr3g091500 10.0kb upstream 10.0kb upstream 10000 false chr3: 41615715-41625714 Medicago truncatula
Medtr3g091500 10.0kb downstream 10.0kb downstream 12470 true chr3: 41625715-41638184 Medicago truncatula
Medtr3g091500 10.0kb downstream 10.0kb downstream 10000 false chr3: 41628185-41638184 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308376 5265 Fabidae View MSA
124065007 5270 Rosid View MSA
123750862 5271 Pentapetalae View MSA
122792992 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.185        
cufflinks 3.184        
cufflinks 4.503       High
cufflinks 0.367       Low
cufflinks 3.656        
cufflinks 0.728        
cufflinks 0.99        
cufflinks 3.418        
cufflinks 0.492       Low

0 Strain