Gene : Medtr3g091460 M. truncatula Mt4.0v1
Defline:  (1 of 210) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Description:  PPR containing plant-like protein
Genomic Order:  4857 Name:  ? Medtr3g091460
Secondary Identifier:  ? PAC:31061410
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g091460 0.5kb upstream 0.5kb upstream 3752 true chr3: 41615539-41619290 Medicago truncatula
Medtr3g091460 0.5kb upstream 0.5kb upstream 500 false chr3: 41615539-41616038 Medicago truncatula
Medtr3g091460 0.5kb downstream 0.5kb downstream 3752 true chr3: 41616039-41619790 Medicago truncatula
Medtr3g091460 0.5kb downstream 0.5kb downstream 500 false chr3: 41619291-41619790 Medicago truncatula
Medtr3g091460 1.0kb upstream 1.0kb upstream 4252 true chr3: 41615039-41619290 Medicago truncatula
Medtr3g091460 1.0kb upstream 1.0kb upstream 1000 false chr3: 41615039-41616038 Medicago truncatula
Medtr3g091460 1.0kb downstream 1.0kb downstream 4252 true chr3: 41616039-41620290 Medicago truncatula
Medtr3g091460 1.0kb downstream 1.0kb downstream 1000 false chr3: 41619291-41620290 Medicago truncatula
Medtr3g091460 2.0kb upstream 2.0kb upstream 5252 true chr3: 41614039-41619290 Medicago truncatula
Medtr3g091460 2.0kb upstream 2.0kb upstream 2000 false chr3: 41614039-41616038 Medicago truncatula
Medtr3g091460 2.0kb downstream 2.0kb downstream 5252 true chr3: 41616039-41621290 Medicago truncatula
Medtr3g091460 2.0kb downstream 2.0kb downstream 2000 false chr3: 41619291-41621290 Medicago truncatula
Medtr3g091460 5.0kb upstream 5.0kb upstream 8252 true chr3: 41611039-41619290 Medicago truncatula
Medtr3g091460 5.0kb upstream 5.0kb upstream 5000 false chr3: 41611039-41616038 Medicago truncatula
Medtr3g091460 5.0kb downstream 5.0kb downstream 8252 true chr3: 41616039-41624290 Medicago truncatula
Medtr3g091460 5.0kb downstream 5.0kb downstream 5000 false chr3: 41619291-41624290 Medicago truncatula
Medtr3g091460 10.0kb upstream 10.0kb upstream 13252 true chr3: 41606039-41619290 Medicago truncatula
Medtr3g091460 10.0kb upstream 10.0kb upstream 10000 false chr3: 41606039-41616038 Medicago truncatula
Medtr3g091460 10.0kb downstream 10.0kb downstream 13252 true chr3: 41616039-41629290 Medicago truncatula
Medtr3g091460 10.0kb downstream 10.0kb downstream 10000 false chr3: 41619291-41629290 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300709 5265 Fabidae View MSA
124060522 5270 Rosid View MSA
123738847 5271 Pentapetalae View MSA
122790244 5272 Eudicot View MSA
122041559 5273 Angiosperm View MSA
121309863 5274 Embryophyte View MSA
123347506 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.804        
cufflinks 7.076        
cufflinks 9.722        
cufflinks 2.814        
cufflinks 15.871     High High
cufflinks 0.699       Low
cufflinks 2.239        
cufflinks 10.067     High  
cufflinks 3.812        

0 Strain