Gene : Medtr3g092230 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR24349//PTHR24349:SF90 - SERINE/THREONINE-PROTEIN KINASE Description:  CDPK-related kinase
Genomic Order:  4922 Name:  ? Medtr3g092230
Secondary Identifier:  ? PAC:31058281
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g092230 0.5kb upstream 0.5kb upstream 7210 true chr3: 42122948-42130157 Medicago truncatula
Medtr3g092230 0.5kb upstream 0.5kb upstream 500 false chr3: 42129658-42130157 Medicago truncatula
Medtr3g092230 0.5kb downstream 0.5kb downstream 7210 true chr3: 42122448-42129657 Medicago truncatula
Medtr3g092230 0.5kb downstream 0.5kb downstream 500 false chr3: 42122448-42122947 Medicago truncatula
Medtr3g092230 1.0kb upstream 1.0kb upstream 7710 true chr3: 42122948-42130657 Medicago truncatula
Medtr3g092230 1.0kb upstream 1.0kb upstream 1000 false chr3: 42129658-42130657 Medicago truncatula
Medtr3g092230 1.0kb downstream 1.0kb downstream 7710 true chr3: 42121948-42129657 Medicago truncatula
Medtr3g092230 1.0kb downstream 1.0kb downstream 1000 false chr3: 42121948-42122947 Medicago truncatula
Medtr3g092230 2.0kb upstream 2.0kb upstream 8710 true chr3: 42122948-42131657 Medicago truncatula
Medtr3g092230 2.0kb upstream 2.0kb upstream 2000 false chr3: 42129658-42131657 Medicago truncatula
Medtr3g092230 2.0kb downstream 2.0kb downstream 8710 true chr3: 42120948-42129657 Medicago truncatula
Medtr3g092230 2.0kb downstream 2.0kb downstream 2000 false chr3: 42120948-42122947 Medicago truncatula
Medtr3g092230 5.0kb upstream 5.0kb upstream 11710 true chr3: 42122948-42134657 Medicago truncatula
Medtr3g092230 5.0kb upstream 5.0kb upstream 5000 false chr3: 42129658-42134657 Medicago truncatula
Medtr3g092230 5.0kb downstream 5.0kb downstream 11710 true chr3: 42117948-42129657 Medicago truncatula
Medtr3g092230 5.0kb downstream 5.0kb downstream 5000 false chr3: 42117948-42122947 Medicago truncatula
Medtr3g092230 10.0kb upstream 10.0kb upstream 16710 true chr3: 42122948-42139657 Medicago truncatula
Medtr3g092230 10.0kb upstream 10.0kb upstream 10000 false chr3: 42129658-42139657 Medicago truncatula
Medtr3g092230 10.0kb downstream 10.0kb downstream 16710 true chr3: 42112948-42129657 Medicago truncatula
Medtr3g092230 10.0kb downstream 10.0kb downstream 10000 false chr3: 42112948-42122947 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303358 5265 Fabidae View MSA
124071018 5270 Rosid View MSA
123749473 5271 Pentapetalae View MSA
122789222 5272 Eudicot View MSA
122047045 5273 Angiosperm View MSA
121343860 5274 Embryophyte View MSA
123379933 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.256     High  
cufflinks 3.94        
cufflinks 3.828        
cufflinks 13.312     High  
cufflinks 3.75        
cufflinks 11.131     High  
cufflinks 21.152     High High
cufflinks 3.197       Low
cufflinks 19.484     High High

0 Strain