Gene : Medtr3g092900 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11746:SF106 - FLAVONE 3'-O-METHYLTRANSFERASE 1 Description:  caffeic acid O-methyltransferase
Genomic Order:  4969 Name:  ? Medtr3g092900
Secondary Identifier:  ? PAC:31059092
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-1121 Medicago truncatula pathologic  
Mtruncatula PWY-2181 Medicago truncatula pathologic  
Mtruncatula PWY-361 Medicago truncatula pathologic  
Mtruncatula PWY-5168 Medicago truncatula pathologic  
Mtruncatula PWY-7186 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g092900 0.5kb upstream 0.5kb upstream 7764 true chr3: 42473090-42480853 Medicago truncatula
Medtr3g092900 0.5kb upstream 0.5kb upstream 500 false chr3: 42480354-42480853 Medicago truncatula
Medtr3g092900 0.5kb downstream 0.5kb downstream 7764 true chr3: 42472590-42480353 Medicago truncatula
Medtr3g092900 0.5kb downstream 0.5kb downstream 500 false chr3: 42472590-42473089 Medicago truncatula
Medtr3g092900 1.0kb upstream 1.0kb upstream 8264 true chr3: 42473090-42481353 Medicago truncatula
Medtr3g092900 1.0kb upstream 1.0kb upstream 1000 false chr3: 42480354-42481353 Medicago truncatula
Medtr3g092900 1.0kb downstream 1.0kb downstream 8264 true chr3: 42472090-42480353 Medicago truncatula
Medtr3g092900 1.0kb downstream 1.0kb downstream 1000 false chr3: 42472090-42473089 Medicago truncatula
Medtr3g092900 2.0kb upstream 2.0kb upstream 9264 true chr3: 42473090-42482353 Medicago truncatula
Medtr3g092900 2.0kb upstream 2.0kb upstream 2000 false chr3: 42480354-42482353 Medicago truncatula
Medtr3g092900 2.0kb downstream 2.0kb downstream 9264 true chr3: 42471090-42480353 Medicago truncatula
Medtr3g092900 2.0kb downstream 2.0kb downstream 2000 false chr3: 42471090-42473089 Medicago truncatula
Medtr3g092900 5.0kb upstream 5.0kb upstream 12264 true chr3: 42473090-42485353 Medicago truncatula
Medtr3g092900 5.0kb upstream 5.0kb upstream 5000 false chr3: 42480354-42485353 Medicago truncatula
Medtr3g092900 5.0kb downstream 5.0kb downstream 12264 true chr3: 42468090-42480353 Medicago truncatula
Medtr3g092900 5.0kb downstream 5.0kb downstream 5000 false chr3: 42468090-42473089 Medicago truncatula
Medtr3g092900 10.0kb upstream 10.0kb upstream 17264 true chr3: 42473090-42490353 Medicago truncatula
Medtr3g092900 10.0kb upstream 10.0kb upstream 10000 false chr3: 42480354-42490353 Medicago truncatula
Medtr3g092900 10.0kb downstream 10.0kb downstream 17264 true chr3: 42463090-42480353 Medicago truncatula
Medtr3g092900 10.0kb downstream 10.0kb downstream 10000 false chr3: 42463090-42473089 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302961 5265 Fabidae View MSA
124065295 5270 Rosid View MSA
123739758 5271 Pentapetalae View MSA
122791331 5272 Eudicot View MSA
122042178 5273 Angiosperm View MSA
123429068 5275 Viridiplantae View MSA
121350689 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.075       Low
cufflinks 25.214     High  
cufflinks 5.119        
cufflinks 19.869     High  
cufflinks 20.643     High  
cufflinks 2.818       Low
cufflinks 11.793     High  
cufflinks 13.959     High  
cufflinks 25.738     High High

0 Strain