Gene : Medtr3g092770 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12882 - SUPPRESSOR OF TY 4 Description:  transcription elongation factor SPT4-like protein
Genomic Order:  4960 Name:  ? Medtr3g092770
Secondary Identifier:  ? PAC:31061190
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g092770 0.5kb upstream 0.5kb upstream 5873 true chr3: 42403412-42409284 Medicago truncatula
Medtr3g092770 0.5kb upstream 0.5kb upstream 500 false chr3: 42403412-42403911 Medicago truncatula
Medtr3g092770 0.5kb downstream 0.5kb downstream 5873 true chr3: 42403912-42409784 Medicago truncatula
Medtr3g092770 0.5kb downstream 0.5kb downstream 500 false chr3: 42409285-42409784 Medicago truncatula
Medtr3g092770 1.0kb upstream 1.0kb upstream 6373 true chr3: 42402912-42409284 Medicago truncatula
Medtr3g092770 1.0kb upstream 1.0kb upstream 1000 false chr3: 42402912-42403911 Medicago truncatula
Medtr3g092770 1.0kb downstream 1.0kb downstream 6373 true chr3: 42403912-42410284 Medicago truncatula
Medtr3g092770 1.0kb downstream 1.0kb downstream 1000 false chr3: 42409285-42410284 Medicago truncatula
Medtr3g092770 2.0kb upstream 2.0kb upstream 7373 true chr3: 42401912-42409284 Medicago truncatula
Medtr3g092770 2.0kb upstream 2.0kb upstream 2000 false chr3: 42401912-42403911 Medicago truncatula
Medtr3g092770 2.0kb downstream 2.0kb downstream 7373 true chr3: 42403912-42411284 Medicago truncatula
Medtr3g092770 2.0kb downstream 2.0kb downstream 2000 false chr3: 42409285-42411284 Medicago truncatula
Medtr3g092770 5.0kb upstream 5.0kb upstream 10373 true chr3: 42398912-42409284 Medicago truncatula
Medtr3g092770 5.0kb upstream 5.0kb upstream 5000 false chr3: 42398912-42403911 Medicago truncatula
Medtr3g092770 5.0kb downstream 5.0kb downstream 10373 true chr3: 42403912-42414284 Medicago truncatula
Medtr3g092770 5.0kb downstream 5.0kb downstream 5000 false chr3: 42409285-42414284 Medicago truncatula
Medtr3g092770 10.0kb upstream 10.0kb upstream 15373 true chr3: 42393912-42409284 Medicago truncatula
Medtr3g092770 10.0kb upstream 10.0kb upstream 10000 false chr3: 42393912-42403911 Medicago truncatula
Medtr3g092770 10.0kb downstream 10.0kb downstream 15373 true chr3: 42403912-42419284 Medicago truncatula
Medtr3g092770 10.0kb downstream 10.0kb downstream 10000 false chr3: 42409285-42419284 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302293 5265 Fabidae View MSA
124065394 5270 Rosid View MSA
123740657 5271 Pentapetalae View MSA
122786663 5272 Eudicot View MSA
122042342 5273 Angiosperm View MSA
121345840 5274 Embryophyte View MSA
123426410 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.471        
cufflinks 0.335       Low
cufflinks 0.391        
cufflinks 0.979       High
cufflinks 0.522        
cufflinks 1.038       High
cufflinks 0.575        
cufflinks 0.354        
cufflinks 0.482        

0 Strain