Gene : Medtr3g093570 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10992:SF743 - ALPHA/BETA-HYDROLASE DOMAIN-CONTAINING PROTEIN Description:  alpha/beta fold hydrolase
Genomic Order:  5016 Name:  ? Medtr3g093570
Secondary Identifier:  ? PAC:31054996
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5173 Medicago truncatula pathologic  
Mtruncatula PWY-5464 Medicago truncatula pathologic  
Mtruncatula PYRUVDEHYD-PWY Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g093570 0.5kb upstream 0.5kb upstream 4059 true chr3: 42751609-42755667 Medicago truncatula
Medtr3g093570 0.5kb upstream 0.5kb upstream 500 false chr3: 42755168-42755667 Medicago truncatula
Medtr3g093570 0.5kb downstream 0.5kb downstream 4059 true chr3: 42751109-42755167 Medicago truncatula
Medtr3g093570 0.5kb downstream 0.5kb downstream 500 false chr3: 42751109-42751608 Medicago truncatula
Medtr3g093570 1.0kb upstream 1.0kb upstream 4559 true chr3: 42751609-42756167 Medicago truncatula
Medtr3g093570 1.0kb upstream 1.0kb upstream 1000 false chr3: 42755168-42756167 Medicago truncatula
Medtr3g093570 1.0kb downstream 1.0kb downstream 4559 true chr3: 42750609-42755167 Medicago truncatula
Medtr3g093570 1.0kb downstream 1.0kb downstream 1000 false chr3: 42750609-42751608 Medicago truncatula
Medtr3g093570 2.0kb upstream 2.0kb upstream 5559 true chr3: 42751609-42757167 Medicago truncatula
Medtr3g093570 2.0kb upstream 2.0kb upstream 2000 false chr3: 42755168-42757167 Medicago truncatula
Medtr3g093570 2.0kb downstream 2.0kb downstream 5559 true chr3: 42749609-42755167 Medicago truncatula
Medtr3g093570 2.0kb downstream 2.0kb downstream 2000 false chr3: 42749609-42751608 Medicago truncatula
Medtr3g093570 5.0kb upstream 5.0kb upstream 8559 true chr3: 42751609-42760167 Medicago truncatula
Medtr3g093570 5.0kb upstream 5.0kb upstream 5000 false chr3: 42755168-42760167 Medicago truncatula
Medtr3g093570 5.0kb downstream 5.0kb downstream 8559 true chr3: 42746609-42755167 Medicago truncatula
Medtr3g093570 5.0kb downstream 5.0kb downstream 5000 false chr3: 42746609-42751608 Medicago truncatula
Medtr3g093570 10.0kb upstream 10.0kb upstream 13559 true chr3: 42751609-42765167 Medicago truncatula
Medtr3g093570 10.0kb upstream 10.0kb upstream 10000 false chr3: 42755168-42765167 Medicago truncatula
Medtr3g093570 10.0kb downstream 10.0kb downstream 13559 true chr3: 42741609-42755167 Medicago truncatula
Medtr3g093570 10.0kb downstream 10.0kb downstream 10000 false chr3: 42741609-42751608 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313808 5265 Fabidae View MSA
124065955 5270 Rosid View MSA
123737061 5271 Pentapetalae View MSA
122788225 5272 Eudicot View MSA
122043724 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121344597 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.602        
cufflinks 2.491        
cufflinks 2.882        
cufflinks 0.188       Low
cufflinks 4.779       High
cufflinks 0.133     Low Low
cufflinks 0.525        
cufflinks 2.942        
cufflinks 0.312        

0 Strain