Gene : Medtr3g083840 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR22957//PTHR22957:SF329 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN Description:  RabGAP/TBC domain protein
Genomic Order:  4344 Name:  ? Medtr3g083840
Secondary Identifier:  ? PAC:31058204
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g083840 0.5kb upstream 0.5kb upstream 6233 true chr3: 37823848-37830080 Medicago truncatula
Medtr3g083840 0.5kb upstream 0.5kb upstream 500 false chr3: 37823848-37824347 Medicago truncatula
Medtr3g083840 0.5kb downstream 0.5kb downstream 6233 true chr3: 37824348-37830580 Medicago truncatula
Medtr3g083840 0.5kb downstream 0.5kb downstream 500 false chr3: 37830081-37830580 Medicago truncatula
Medtr3g083840 1.0kb upstream 1.0kb upstream 6733 true chr3: 37823348-37830080 Medicago truncatula
Medtr3g083840 1.0kb upstream 1.0kb upstream 1000 false chr3: 37823348-37824347 Medicago truncatula
Medtr3g083840 1.0kb downstream 1.0kb downstream 6733 true chr3: 37824348-37831080 Medicago truncatula
Medtr3g083840 1.0kb downstream 1.0kb downstream 1000 false chr3: 37830081-37831080 Medicago truncatula
Medtr3g083840 2.0kb upstream 2.0kb upstream 7733 true chr3: 37822348-37830080 Medicago truncatula
Medtr3g083840 2.0kb upstream 2.0kb upstream 2000 false chr3: 37822348-37824347 Medicago truncatula
Medtr3g083840 2.0kb downstream 2.0kb downstream 7733 true chr3: 37824348-37832080 Medicago truncatula
Medtr3g083840 2.0kb downstream 2.0kb downstream 2000 false chr3: 37830081-37832080 Medicago truncatula
Medtr3g083840 5.0kb upstream 5.0kb upstream 10733 true chr3: 37819348-37830080 Medicago truncatula
Medtr3g083840 5.0kb upstream 5.0kb upstream 5000 false chr3: 37819348-37824347 Medicago truncatula
Medtr3g083840 5.0kb downstream 5.0kb downstream 10733 true chr3: 37824348-37835080 Medicago truncatula
Medtr3g083840 5.0kb downstream 5.0kb downstream 5000 false chr3: 37830081-37835080 Medicago truncatula
Medtr3g083840 10.0kb upstream 10.0kb upstream 15733 true chr3: 37814348-37830080 Medicago truncatula
Medtr3g083840 10.0kb upstream 10.0kb upstream 10000 false chr3: 37814348-37824347 Medicago truncatula
Medtr3g083840 10.0kb downstream 10.0kb downstream 15733 true chr3: 37824348-37840080 Medicago truncatula
Medtr3g083840 10.0kb downstream 10.0kb downstream 10000 false chr3: 37830081-37840080 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297611 5265 Fabidae View MSA
124070393 5270 Rosid View MSA
123742752 5271 Pentapetalae View MSA
122794560 5272 Eudicot View MSA
122050353 5273 Angiosperm View MSA
121347647 5274 Embryophyte View MSA
123426413 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.632        
cufflinks 1.004        
cufflinks 0.894        
cufflinks 0.508       Low
cufflinks 1.347       High
cufflinks 0.655        
cufflinks 0.603        
cufflinks 0.726        
cufflinks 0.596        

0 Strain