Gene : Medtr3g085590 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13000 - NUCLEOPORIN P54 Description:  nucleoporin complex subunit 54
Genomic Order:  4467 Name:  ? Medtr3g085590
Secondary Identifier:  ? PAC:31056642
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g085590 0.5kb upstream 0.5kb upstream 5507 true chr3: 38683174-38688680 Medicago truncatula
Medtr3g085590 0.5kb upstream 0.5kb upstream 500 false chr3: 38683174-38683673 Medicago truncatula
Medtr3g085590 0.5kb downstream 0.5kb downstream 5507 true chr3: 38683674-38689180 Medicago truncatula
Medtr3g085590 0.5kb downstream 0.5kb downstream 500 false chr3: 38688681-38689180 Medicago truncatula
Medtr3g085590 1.0kb upstream 1.0kb upstream 6007 true chr3: 38682674-38688680 Medicago truncatula
Medtr3g085590 1.0kb upstream 1.0kb upstream 1000 false chr3: 38682674-38683673 Medicago truncatula
Medtr3g085590 1.0kb downstream 1.0kb downstream 6007 true chr3: 38683674-38689680 Medicago truncatula
Medtr3g085590 1.0kb downstream 1.0kb downstream 1000 false chr3: 38688681-38689680 Medicago truncatula
Medtr3g085590 2.0kb upstream 2.0kb upstream 7007 true chr3: 38681674-38688680 Medicago truncatula
Medtr3g085590 2.0kb upstream 2.0kb upstream 2000 false chr3: 38681674-38683673 Medicago truncatula
Medtr3g085590 2.0kb downstream 2.0kb downstream 7007 true chr3: 38683674-38690680 Medicago truncatula
Medtr3g085590 2.0kb downstream 2.0kb downstream 2000 false chr3: 38688681-38690680 Medicago truncatula
Medtr3g085590 5.0kb upstream 5.0kb upstream 10007 true chr3: 38678674-38688680 Medicago truncatula
Medtr3g085590 5.0kb upstream 5.0kb upstream 5000 false chr3: 38678674-38683673 Medicago truncatula
Medtr3g085590 5.0kb downstream 5.0kb downstream 10007 true chr3: 38683674-38693680 Medicago truncatula
Medtr3g085590 5.0kb downstream 5.0kb downstream 5000 false chr3: 38688681-38693680 Medicago truncatula
Medtr3g085590 10.0kb upstream 10.0kb upstream 15007 true chr3: 38673674-38688680 Medicago truncatula
Medtr3g085590 10.0kb upstream 10.0kb upstream 10000 false chr3: 38673674-38683673 Medicago truncatula
Medtr3g085590 10.0kb downstream 10.0kb downstream 15007 true chr3: 38683674-38698680 Medicago truncatula
Medtr3g085590 10.0kb downstream 10.0kb downstream 10000 false chr3: 38688681-38698680 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301153 5265 Fabidae View MSA
124068868 5270 Rosid View MSA
123740833 5271 Pentapetalae View MSA
122795867 5272 Eudicot View MSA
122045094 5273 Angiosperm View MSA
121347023 5274 Embryophyte View MSA
123424455 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.031        
cufflinks 0.891       Low
cufflinks 1.04        
cufflinks 1.597        
cufflinks 1.251        
cufflinks 1.768        
cufflinks 2.185        
cufflinks 0.872       Low
cufflinks 2.921       High

0 Strain