Gene : Medtr3g085640 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22642:SF7 - UREASE Description:  urease
Genomic Order:  4472 Name:  ? Medtr3g085640
Secondary Identifier:  ? PAC:31057662
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5704 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g085640 0.5kb upstream 0.5kb upstream 8257 true chr3: 38723189-38731445 Medicago truncatula
Medtr3g085640 0.5kb upstream 0.5kb upstream 500 false chr3: 38723189-38723688 Medicago truncatula
Medtr3g085640 0.5kb downstream 0.5kb downstream 8257 true chr3: 38723689-38731945 Medicago truncatula
Medtr3g085640 0.5kb downstream 0.5kb downstream 500 false chr3: 38731446-38731945 Medicago truncatula
Medtr3g085640 1.0kb upstream 1.0kb upstream 8757 true chr3: 38722689-38731445 Medicago truncatula
Medtr3g085640 1.0kb upstream 1.0kb upstream 1000 false chr3: 38722689-38723688 Medicago truncatula
Medtr3g085640 1.0kb downstream 1.0kb downstream 8757 true chr3: 38723689-38732445 Medicago truncatula
Medtr3g085640 1.0kb downstream 1.0kb downstream 1000 false chr3: 38731446-38732445 Medicago truncatula
Medtr3g085640 2.0kb upstream 2.0kb upstream 9757 true chr3: 38721689-38731445 Medicago truncatula
Medtr3g085640 2.0kb upstream 2.0kb upstream 2000 false chr3: 38721689-38723688 Medicago truncatula
Medtr3g085640 2.0kb downstream 2.0kb downstream 9757 true chr3: 38723689-38733445 Medicago truncatula
Medtr3g085640 2.0kb downstream 2.0kb downstream 2000 false chr3: 38731446-38733445 Medicago truncatula
Medtr3g085640 5.0kb upstream 5.0kb upstream 12757 true chr3: 38718689-38731445 Medicago truncatula
Medtr3g085640 5.0kb upstream 5.0kb upstream 5000 false chr3: 38718689-38723688 Medicago truncatula
Medtr3g085640 5.0kb downstream 5.0kb downstream 12757 true chr3: 38723689-38736445 Medicago truncatula
Medtr3g085640 5.0kb downstream 5.0kb downstream 5000 false chr3: 38731446-38736445 Medicago truncatula
Medtr3g085640 10.0kb upstream 10.0kb upstream 17757 true chr3: 38713689-38731445 Medicago truncatula
Medtr3g085640 10.0kb upstream 10.0kb upstream 10000 false chr3: 38713689-38723688 Medicago truncatula
Medtr3g085640 10.0kb downstream 10.0kb downstream 17757 true chr3: 38723689-38741445 Medicago truncatula
Medtr3g085640 10.0kb downstream 10.0kb downstream 10000 false chr3: 38731446-38741445 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302667 5265 Fabidae View MSA
124068403 5270 Rosid View MSA
123740232 5271 Pentapetalae View MSA
122790945 5272 Eudicot View MSA
122047668 5273 Angiosperm View MSA
121343969 5274 Embryophyte View MSA
123425205 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.878       High
cufflinks 0.224        
cufflinks 0.082       Low
cufflinks 0.373        
cufflinks 0.273        
cufflinks 0.278        
cufflinks 0.804       High
cufflinks 0.129       Low
cufflinks 1.061       High

0 Strain