Gene : Medtr3g085490 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11593 - 60S RIBOSOMAL PROTEIN L17 Description:  60S ribosomal protein L17A
Genomic Order:  4460 Name:  ? Medtr3g085490
Secondary Identifier:  ? PAC:31060486
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g085490 0.5kb upstream 0.5kb upstream 2764 true chr3: 38630048-38632811 Medicago truncatula
Medtr3g085490 0.5kb upstream 0.5kb upstream 500 false chr3: 38630048-38630547 Medicago truncatula
Medtr3g085490 0.5kb downstream 0.5kb downstream 2764 true chr3: 38630548-38633311 Medicago truncatula
Medtr3g085490 0.5kb downstream 0.5kb downstream 500 false chr3: 38632812-38633311 Medicago truncatula
Medtr3g085490 1.0kb upstream 1.0kb upstream 3264 true chr3: 38629548-38632811 Medicago truncatula
Medtr3g085490 1.0kb upstream 1.0kb upstream 1000 false chr3: 38629548-38630547 Medicago truncatula
Medtr3g085490 1.0kb downstream 1.0kb downstream 3264 true chr3: 38630548-38633811 Medicago truncatula
Medtr3g085490 1.0kb downstream 1.0kb downstream 1000 false chr3: 38632812-38633811 Medicago truncatula
Medtr3g085490 2.0kb upstream 2.0kb upstream 4264 true chr3: 38628548-38632811 Medicago truncatula
Medtr3g085490 2.0kb upstream 2.0kb upstream 2000 false chr3: 38628548-38630547 Medicago truncatula
Medtr3g085490 2.0kb downstream 2.0kb downstream 4264 true chr3: 38630548-38634811 Medicago truncatula
Medtr3g085490 2.0kb downstream 2.0kb downstream 2000 false chr3: 38632812-38634811 Medicago truncatula
Medtr3g085490 5.0kb upstream 5.0kb upstream 7264 true chr3: 38625548-38632811 Medicago truncatula
Medtr3g085490 5.0kb upstream 5.0kb upstream 5000 false chr3: 38625548-38630547 Medicago truncatula
Medtr3g085490 5.0kb downstream 5.0kb downstream 7264 true chr3: 38630548-38637811 Medicago truncatula
Medtr3g085490 5.0kb downstream 5.0kb downstream 5000 false chr3: 38632812-38637811 Medicago truncatula
Medtr3g085490 10.0kb upstream 10.0kb upstream 12264 true chr3: 38620548-38632811 Medicago truncatula
Medtr3g085490 10.0kb upstream 10.0kb upstream 10000 false chr3: 38620548-38630547 Medicago truncatula
Medtr3g085490 10.0kb downstream 10.0kb downstream 12264 true chr3: 38630548-38642811 Medicago truncatula
Medtr3g085490 10.0kb downstream 10.0kb downstream 10000 false chr3: 38632812-38642811 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308747 5265 Fabidae View MSA
124061649 5270 Rosid View MSA
123752995 5271 Pentapetalae View MSA
122790046 5272 Eudicot View MSA
122051496 5273 Angiosperm View MSA
121350050 5274 Embryophyte View MSA
123424396 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.09     High  
cufflinks 26.237     High Low
cufflinks 29.857     High  
cufflinks 196.12     High High
cufflinks 41.583     High  
cufflinks 153.555     High High
cufflinks 84.635     High  
cufflinks 33.728     High  
cufflinks 110.767     High  

0 Strain