Gene : Medtr3g085280 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF04359 - Protein of unknown function (DUF493) (DUF493) Description:  DUF493 family protein
Genomic Order:  4443 Name:  ? Medtr3g085280
Secondary Identifier:  ? PAC:31054377
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g085280 0.5kb upstream 0.5kb upstream 3874 true chr3: 38536068-38539941 Medicago truncatula
Medtr3g085280 0.5kb upstream 0.5kb upstream 500 false chr3: 38539442-38539941 Medicago truncatula
Medtr3g085280 0.5kb downstream 0.5kb downstream 3874 true chr3: 38535568-38539441 Medicago truncatula
Medtr3g085280 0.5kb downstream 0.5kb downstream 500 false chr3: 38535568-38536067 Medicago truncatula
Medtr3g085280 1.0kb upstream 1.0kb upstream 4374 true chr3: 38536068-38540441 Medicago truncatula
Medtr3g085280 1.0kb upstream 1.0kb upstream 1000 false chr3: 38539442-38540441 Medicago truncatula
Medtr3g085280 1.0kb downstream 1.0kb downstream 4374 true chr3: 38535068-38539441 Medicago truncatula
Medtr3g085280 1.0kb downstream 1.0kb downstream 1000 false chr3: 38535068-38536067 Medicago truncatula
Medtr3g085280 2.0kb upstream 2.0kb upstream 5374 true chr3: 38536068-38541441 Medicago truncatula
Medtr3g085280 2.0kb upstream 2.0kb upstream 2000 false chr3: 38539442-38541441 Medicago truncatula
Medtr3g085280 2.0kb downstream 2.0kb downstream 5374 true chr3: 38534068-38539441 Medicago truncatula
Medtr3g085280 2.0kb downstream 2.0kb downstream 2000 false chr3: 38534068-38536067 Medicago truncatula
Medtr3g085280 5.0kb upstream 5.0kb upstream 8374 true chr3: 38536068-38544441 Medicago truncatula
Medtr3g085280 5.0kb upstream 5.0kb upstream 5000 false chr3: 38539442-38544441 Medicago truncatula
Medtr3g085280 5.0kb downstream 5.0kb downstream 8374 true chr3: 38531068-38539441 Medicago truncatula
Medtr3g085280 5.0kb downstream 5.0kb downstream 5000 false chr3: 38531068-38536067 Medicago truncatula
Medtr3g085280 10.0kb upstream 10.0kb upstream 13374 true chr3: 38536068-38549441 Medicago truncatula
Medtr3g085280 10.0kb upstream 10.0kb upstream 10000 false chr3: 38539442-38549441 Medicago truncatula
Medtr3g085280 10.0kb downstream 10.0kb downstream 13374 true chr3: 38526068-38539441 Medicago truncatula
Medtr3g085280 10.0kb downstream 10.0kb downstream 10000 false chr3: 38526068-38536067 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300890 5265 Fabidae View MSA
124062101 5270 Rosid View MSA
123739527 5271 Pentapetalae View MSA
122786727 5272 Eudicot View MSA
122048054 5273 Angiosperm View MSA
121348978 5274 Embryophyte View MSA
123426420 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.521        
cufflinks 19.629     High High
cufflinks 18.389     High  
cufflinks 3.982        
cufflinks 20.747     High High
cufflinks 2.523       Low
cufflinks 3.943        
cufflinks 16.935     High  
cufflinks 3.638        

0 Strain