Gene : Medtr3g085720 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG3212 - Uncharacterized conserved protein related to IojAP Description:  ribosome silencing factor
Genomic Order:  4481 Name:  ? Medtr3g085720
Secondary Identifier:  ? PAC:31054688
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g085720 0.5kb upstream 0.5kb upstream 3812 true chr3: 38786343-38790154 Medicago truncatula
Medtr3g085720 0.5kb upstream 0.5kb upstream 500 false chr3: 38786343-38786842 Medicago truncatula
Medtr3g085720 0.5kb downstream 0.5kb downstream 3812 true chr3: 38786843-38790654 Medicago truncatula
Medtr3g085720 0.5kb downstream 0.5kb downstream 500 false chr3: 38790155-38790654 Medicago truncatula
Medtr3g085720 1.0kb upstream 1.0kb upstream 4312 true chr3: 38785843-38790154 Medicago truncatula
Medtr3g085720 1.0kb upstream 1.0kb upstream 1000 false chr3: 38785843-38786842 Medicago truncatula
Medtr3g085720 1.0kb downstream 1.0kb downstream 4312 true chr3: 38786843-38791154 Medicago truncatula
Medtr3g085720 1.0kb downstream 1.0kb downstream 1000 false chr3: 38790155-38791154 Medicago truncatula
Medtr3g085720 2.0kb upstream 2.0kb upstream 5312 true chr3: 38784843-38790154 Medicago truncatula
Medtr3g085720 2.0kb upstream 2.0kb upstream 2000 false chr3: 38784843-38786842 Medicago truncatula
Medtr3g085720 2.0kb downstream 2.0kb downstream 5312 true chr3: 38786843-38792154 Medicago truncatula
Medtr3g085720 2.0kb downstream 2.0kb downstream 2000 false chr3: 38790155-38792154 Medicago truncatula
Medtr3g085720 5.0kb upstream 5.0kb upstream 8312 true chr3: 38781843-38790154 Medicago truncatula
Medtr3g085720 5.0kb upstream 5.0kb upstream 5000 false chr3: 38781843-38786842 Medicago truncatula
Medtr3g085720 5.0kb downstream 5.0kb downstream 8312 true chr3: 38786843-38795154 Medicago truncatula
Medtr3g085720 5.0kb downstream 5.0kb downstream 5000 false chr3: 38790155-38795154 Medicago truncatula
Medtr3g085720 10.0kb upstream 10.0kb upstream 13312 true chr3: 38776843-38790154 Medicago truncatula
Medtr3g085720 10.0kb upstream 10.0kb upstream 10000 false chr3: 38776843-38786842 Medicago truncatula
Medtr3g085720 10.0kb downstream 10.0kb downstream 13312 true chr3: 38786843-38800154 Medicago truncatula
Medtr3g085720 10.0kb downstream 10.0kb downstream 10000 false chr3: 38790155-38800154 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308437 5265 Fabidae View MSA
124063085 5270 Rosid View MSA
123749362 5271 Pentapetalae View MSA
122773108 5272 Eudicot View MSA
122047007 5273 Angiosperm View MSA
121349437 5274 Embryophyte View MSA
123381310 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.933       High
cufflinks 4.626        
cufflinks 4.384        
cufflinks 4.507        
cufflinks 4.603        
cufflinks 2.991       Low
cufflinks 3.701        
cufflinks 3.659        
cufflinks 5.062        

0 Strain