Gene : Medtr3g086340 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR10972:SF67 - OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 1D Description:  OSBP(oxysterol-binding protein)-related protein 1C
Genomic Order:  4525 Name:  ? Medtr3g086340
Secondary Identifier:  ? PAC:31057448
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g086340 0.5kb upstream 0.5kb upstream 8891 true chr3: 39100199-39109089 Medicago truncatula
Medtr3g086340 0.5kb upstream 0.5kb upstream 500 false chr3: 39100199-39100698 Medicago truncatula
Medtr3g086340 0.5kb downstream 0.5kb downstream 8891 true chr3: 39100699-39109589 Medicago truncatula
Medtr3g086340 0.5kb downstream 0.5kb downstream 500 false chr3: 39109090-39109589 Medicago truncatula
Medtr3g086340 1.0kb upstream 1.0kb upstream 9391 true chr3: 39099699-39109089 Medicago truncatula
Medtr3g086340 1.0kb upstream 1.0kb upstream 1000 false chr3: 39099699-39100698 Medicago truncatula
Medtr3g086340 1.0kb downstream 1.0kb downstream 9391 true chr3: 39100699-39110089 Medicago truncatula
Medtr3g086340 1.0kb downstream 1.0kb downstream 1000 false chr3: 39109090-39110089 Medicago truncatula
Medtr3g086340 2.0kb upstream 2.0kb upstream 10391 true chr3: 39098699-39109089 Medicago truncatula
Medtr3g086340 2.0kb upstream 2.0kb upstream 2000 false chr3: 39098699-39100698 Medicago truncatula
Medtr3g086340 2.0kb downstream 2.0kb downstream 10391 true chr3: 39100699-39111089 Medicago truncatula
Medtr3g086340 2.0kb downstream 2.0kb downstream 2000 false chr3: 39109090-39111089 Medicago truncatula
Medtr3g086340 5.0kb upstream 5.0kb upstream 13391 true chr3: 39095699-39109089 Medicago truncatula
Medtr3g086340 5.0kb upstream 5.0kb upstream 5000 false chr3: 39095699-39100698 Medicago truncatula
Medtr3g086340 5.0kb downstream 5.0kb downstream 13391 true chr3: 39100699-39114089 Medicago truncatula
Medtr3g086340 5.0kb downstream 5.0kb downstream 5000 false chr3: 39109090-39114089 Medicago truncatula
Medtr3g086340 10.0kb upstream 10.0kb upstream 18391 true chr3: 39090699-39109089 Medicago truncatula
Medtr3g086340 10.0kb upstream 10.0kb upstream 10000 false chr3: 39090699-39100698 Medicago truncatula
Medtr3g086340 10.0kb downstream 10.0kb downstream 18391 true chr3: 39100699-39119089 Medicago truncatula
Medtr3g086340 10.0kb downstream 10.0kb downstream 10000 false chr3: 39109090-39119089 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307593 5265 Fabidae View MSA
124068428 5270 Rosid View MSA
123737514 5271 Pentapetalae View MSA
122791417 5272 Eudicot View MSA
122042375 5273 Angiosperm View MSA
121309954 5274 Embryophyte View MSA
123428535 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.101       Low
cufflinks 0.47        
cufflinks 0.505        
cufflinks 0.072       Low
cufflinks 0.643       High
cufflinks 0.094     Low Low
cufflinks 0.291        
cufflinks 0.327        
cufflinks 0.326        

0 Strain