Gene : Medtr3g086250 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12428:SF18 - ALBINO3-LIKE PROTEIN 1, CHLOROPLASTIC Description:  60 kDa inner membrane protein
Genomic Order:  4519 Name:  ? Medtr3g086250
Secondary Identifier:  ? PAC:31060939
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g086250 0.5kb upstream 0.5kb upstream 6763 true chr3: 39021280-39028042 Medicago truncatula
Medtr3g086250 0.5kb upstream 0.5kb upstream 500 false chr3: 39021280-39021779 Medicago truncatula
Medtr3g086250 0.5kb downstream 0.5kb downstream 6763 true chr3: 39021780-39028542 Medicago truncatula
Medtr3g086250 0.5kb downstream 0.5kb downstream 500 false chr3: 39028043-39028542 Medicago truncatula
Medtr3g086250 1.0kb upstream 1.0kb upstream 7263 true chr3: 39020780-39028042 Medicago truncatula
Medtr3g086250 1.0kb upstream 1.0kb upstream 1000 false chr3: 39020780-39021779 Medicago truncatula
Medtr3g086250 1.0kb downstream 1.0kb downstream 7263 true chr3: 39021780-39029042 Medicago truncatula
Medtr3g086250 1.0kb downstream 1.0kb downstream 1000 false chr3: 39028043-39029042 Medicago truncatula
Medtr3g086250 2.0kb upstream 2.0kb upstream 8263 true chr3: 39019780-39028042 Medicago truncatula
Medtr3g086250 2.0kb upstream 2.0kb upstream 2000 false chr3: 39019780-39021779 Medicago truncatula
Medtr3g086250 2.0kb downstream 2.0kb downstream 8263 true chr3: 39021780-39030042 Medicago truncatula
Medtr3g086250 2.0kb downstream 2.0kb downstream 2000 false chr3: 39028043-39030042 Medicago truncatula
Medtr3g086250 5.0kb upstream 5.0kb upstream 11263 true chr3: 39016780-39028042 Medicago truncatula
Medtr3g086250 5.0kb upstream 5.0kb upstream 5000 false chr3: 39016780-39021779 Medicago truncatula
Medtr3g086250 5.0kb downstream 5.0kb downstream 11263 true chr3: 39021780-39033042 Medicago truncatula
Medtr3g086250 5.0kb downstream 5.0kb downstream 5000 false chr3: 39028043-39033042 Medicago truncatula
Medtr3g086250 10.0kb upstream 10.0kb upstream 16263 true chr3: 39011780-39028042 Medicago truncatula
Medtr3g086250 10.0kb upstream 10.0kb upstream 10000 false chr3: 39011780-39021779 Medicago truncatula
Medtr3g086250 10.0kb downstream 10.0kb downstream 16263 true chr3: 39021780-39038042 Medicago truncatula
Medtr3g086250 10.0kb downstream 10.0kb downstream 10000 false chr3: 39028043-39038042 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304757 5265 Fabidae View MSA
124067959 5270 Rosid View MSA
123740459 5271 Pentapetalae View MSA
122792241 5272 Eudicot View MSA
122043512 5273 Angiosperm View MSA
121310140 5274 Embryophyte View MSA
123428331 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.417       Low
cufflinks 12.834     High  
cufflinks 16.509     High High
cufflinks 1.969       Low
cufflinks 14.93     High  
cufflinks 2.145        
cufflinks 3.017        
cufflinks 15.744     High High
cufflinks 5.164        

0 Strain