Gene : Medtr3g086100 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR26402//PTHR26402:SF608 - RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM Description:  two-component response regulator ARR2-like protein
Genomic Order:  4506 Name:  ? Medtr3g086100
Secondary Identifier:  ? PAC:31059263
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g086100 0.5kb upstream 0.5kb upstream 4778 true chr3: 38950711-38955488 Medicago truncatula
Medtr3g086100 0.5kb upstream 0.5kb upstream 500 false chr3: 38954989-38955488 Medicago truncatula
Medtr3g086100 0.5kb downstream 0.5kb downstream 4778 true chr3: 38950211-38954988 Medicago truncatula
Medtr3g086100 0.5kb downstream 0.5kb downstream 500 false chr3: 38950211-38950710 Medicago truncatula
Medtr3g086100 1.0kb upstream 1.0kb upstream 5278 true chr3: 38950711-38955988 Medicago truncatula
Medtr3g086100 1.0kb upstream 1.0kb upstream 1000 false chr3: 38954989-38955988 Medicago truncatula
Medtr3g086100 1.0kb downstream 1.0kb downstream 5278 true chr3: 38949711-38954988 Medicago truncatula
Medtr3g086100 1.0kb downstream 1.0kb downstream 1000 false chr3: 38949711-38950710 Medicago truncatula
Medtr3g086100 2.0kb upstream 2.0kb upstream 6278 true chr3: 38950711-38956988 Medicago truncatula
Medtr3g086100 2.0kb upstream 2.0kb upstream 2000 false chr3: 38954989-38956988 Medicago truncatula
Medtr3g086100 2.0kb downstream 2.0kb downstream 6278 true chr3: 38948711-38954988 Medicago truncatula
Medtr3g086100 2.0kb downstream 2.0kb downstream 2000 false chr3: 38948711-38950710 Medicago truncatula
Medtr3g086100 5.0kb upstream 5.0kb upstream 9278 true chr3: 38950711-38959988 Medicago truncatula
Medtr3g086100 5.0kb upstream 5.0kb upstream 5000 false chr3: 38954989-38959988 Medicago truncatula
Medtr3g086100 5.0kb downstream 5.0kb downstream 9278 true chr3: 38945711-38954988 Medicago truncatula
Medtr3g086100 5.0kb downstream 5.0kb downstream 5000 false chr3: 38945711-38950710 Medicago truncatula
Medtr3g086100 10.0kb upstream 10.0kb upstream 14278 true chr3: 38950711-38964988 Medicago truncatula
Medtr3g086100 10.0kb upstream 10.0kb upstream 10000 false chr3: 38954989-38964988 Medicago truncatula
Medtr3g086100 10.0kb downstream 10.0kb downstream 14278 true chr3: 38940711-38954988 Medicago truncatula
Medtr3g086100 10.0kb downstream 10.0kb downstream 10000 false chr3: 38940711-38950710 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308568 5265 Fabidae View MSA
124074544 5270 Rosid View MSA
123752744 5271 Pentapetalae View MSA
122797364 5272 Eudicot View MSA
122048998 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.285       Low
cufflinks 1.37       High
cufflinks 0.731        
cufflinks 0.319       Low
cufflinks 1.203       High
cufflinks 0.542        
cufflinks 0.34        
cufflinks 1.069        
cufflinks 0.523        

0 Strain