Gene : Medtr3g086770 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR18934:SF140 - HELICASE , IBR AND ZINC FINGER PROTEIN DOMAIN-CONTAINING PROTEIN Description:  helicase, IBR and zinc finger protein
Genomic Order:  4561 Name:  ? Medtr3g086770
Secondary Identifier:  ? PAC:31055707
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g086770 0.5kb upstream 0.5kb upstream 6946 true chr3: 39316838-39323783 Medicago truncatula
Medtr3g086770 0.5kb upstream 0.5kb upstream 500 false chr3: 39323284-39323783 Medicago truncatula
Medtr3g086770 0.5kb downstream 0.5kb downstream 6946 true chr3: 39316338-39323283 Medicago truncatula
Medtr3g086770 0.5kb downstream 0.5kb downstream 500 false chr3: 39316338-39316837 Medicago truncatula
Medtr3g086770 1.0kb upstream 1.0kb upstream 7446 true chr3: 39316838-39324283 Medicago truncatula
Medtr3g086770 1.0kb upstream 1.0kb upstream 1000 false chr3: 39323284-39324283 Medicago truncatula
Medtr3g086770 1.0kb downstream 1.0kb downstream 7446 true chr3: 39315838-39323283 Medicago truncatula
Medtr3g086770 1.0kb downstream 1.0kb downstream 1000 false chr3: 39315838-39316837 Medicago truncatula
Medtr3g086770 2.0kb upstream 2.0kb upstream 8446 true chr3: 39316838-39325283 Medicago truncatula
Medtr3g086770 2.0kb upstream 2.0kb upstream 2000 false chr3: 39323284-39325283 Medicago truncatula
Medtr3g086770 2.0kb downstream 2.0kb downstream 8446 true chr3: 39314838-39323283 Medicago truncatula
Medtr3g086770 2.0kb downstream 2.0kb downstream 2000 false chr3: 39314838-39316837 Medicago truncatula
Medtr3g086770 5.0kb upstream 5.0kb upstream 11446 true chr3: 39316838-39328283 Medicago truncatula
Medtr3g086770 5.0kb upstream 5.0kb upstream 5000 false chr3: 39323284-39328283 Medicago truncatula
Medtr3g086770 5.0kb downstream 5.0kb downstream 11446 true chr3: 39311838-39323283 Medicago truncatula
Medtr3g086770 5.0kb downstream 5.0kb downstream 5000 false chr3: 39311838-39316837 Medicago truncatula
Medtr3g086770 10.0kb upstream 10.0kb upstream 16446 true chr3: 39316838-39333283 Medicago truncatula
Medtr3g086770 10.0kb upstream 10.0kb upstream 10000 false chr3: 39323284-39333283 Medicago truncatula
Medtr3g086770 10.0kb downstream 10.0kb downstream 16446 true chr3: 39306838-39323283 Medicago truncatula
Medtr3g086770 10.0kb downstream 10.0kb downstream 10000 false chr3: 39306838-39316837 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303749 5265 Fabidae View MSA
124065250 5270 Rosid View MSA
123737649 5271 Pentapetalae View MSA
122792677 5272 Eudicot View MSA
122041869 5273 Angiosperm View MSA
121309896 5274 Embryophyte View MSA
123347530 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.347        
cufflinks 6.234        
cufflinks 7.033        
cufflinks 0.79       Low
cufflinks 9.916       High
cufflinks 0.712       Low
cufflinks 2.635        
cufflinks 4.911        
cufflinks 3.835        

0 Strain