Gene : Medtr3g086530 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR24058//PTHR24058:SF55 - DUAL SPECIFICITY PROTEIN KINASE Description:  kinase AFC1
Genomic Order:  4541 Name:  ? Medtr3g086530
Secondary Identifier:  ? PAC:31056589
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g086530 0.5kb upstream 0.5kb upstream 5862 true chr3: 39206475-39212336 Medicago truncatula
Medtr3g086530 0.5kb upstream 0.5kb upstream 500 false chr3: 39206475-39206974 Medicago truncatula
Medtr3g086530 0.5kb downstream 0.5kb downstream 5862 true chr3: 39206975-39212836 Medicago truncatula
Medtr3g086530 0.5kb downstream 0.5kb downstream 500 false chr3: 39212337-39212836 Medicago truncatula
Medtr3g086530 1.0kb upstream 1.0kb upstream 6362 true chr3: 39205975-39212336 Medicago truncatula
Medtr3g086530 1.0kb upstream 1.0kb upstream 1000 false chr3: 39205975-39206974 Medicago truncatula
Medtr3g086530 1.0kb downstream 1.0kb downstream 6362 true chr3: 39206975-39213336 Medicago truncatula
Medtr3g086530 1.0kb downstream 1.0kb downstream 1000 false chr3: 39212337-39213336 Medicago truncatula
Medtr3g086530 2.0kb upstream 2.0kb upstream 7362 true chr3: 39204975-39212336 Medicago truncatula
Medtr3g086530 2.0kb upstream 2.0kb upstream 2000 false chr3: 39204975-39206974 Medicago truncatula
Medtr3g086530 2.0kb downstream 2.0kb downstream 7362 true chr3: 39206975-39214336 Medicago truncatula
Medtr3g086530 2.0kb downstream 2.0kb downstream 2000 false chr3: 39212337-39214336 Medicago truncatula
Medtr3g086530 5.0kb upstream 5.0kb upstream 10362 true chr3: 39201975-39212336 Medicago truncatula
Medtr3g086530 5.0kb upstream 5.0kb upstream 5000 false chr3: 39201975-39206974 Medicago truncatula
Medtr3g086530 5.0kb downstream 5.0kb downstream 10362 true chr3: 39206975-39217336 Medicago truncatula
Medtr3g086530 5.0kb downstream 5.0kb downstream 5000 false chr3: 39212337-39217336 Medicago truncatula
Medtr3g086530 10.0kb upstream 10.0kb upstream 15362 true chr3: 39196975-39212336 Medicago truncatula
Medtr3g086530 10.0kb upstream 10.0kb upstream 10000 false chr3: 39196975-39206974 Medicago truncatula
Medtr3g086530 10.0kb downstream 10.0kb downstream 15362 true chr3: 39206975-39222336 Medicago truncatula
Medtr3g086530 10.0kb downstream 10.0kb downstream 10000 false chr3: 39212337-39222336 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311889 5265 Fabidae View MSA
124071659 5270 Rosid View MSA
123751115 5271 Pentapetalae View MSA
122792813 5272 Eudicot View MSA
122041750 5273 Angiosperm View MSA
121349585 5274 Embryophyte View MSA
123426533 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.387        
cufflinks 0.454        
cufflinks 0.607       High
cufflinks 0.418        
cufflinks 0.545       High
cufflinks 0.3       Low
cufflinks 0.33        
cufflinks 0.428        
cufflinks 0.326        

0 Strain