Gene : Medtr3g086590 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12735:SF11 - SUFE-LIKE PROTEIN 2, CHLOROPLASTIC Description:  Fe-S metabolism associated domain protein
Genomic Order:  4546 Name:  ? Medtr3g086590
Secondary Identifier:  ? PAC:31055767
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g086590 0.5kb upstream 0.5kb upstream 1784 true chr3: 39248588-39250371 Medicago truncatula
Medtr3g086590 0.5kb upstream 0.5kb upstream 500 false chr3: 39248588-39249087 Medicago truncatula
Medtr3g086590 0.5kb downstream 0.5kb downstream 1784 true chr3: 39249088-39250871 Medicago truncatula
Medtr3g086590 0.5kb downstream 0.5kb downstream 500 false chr3: 39250372-39250871 Medicago truncatula
Medtr3g086590 1.0kb upstream 1.0kb upstream 2284 true chr3: 39248088-39250371 Medicago truncatula
Medtr3g086590 1.0kb upstream 1.0kb upstream 1000 false chr3: 39248088-39249087 Medicago truncatula
Medtr3g086590 1.0kb downstream 1.0kb downstream 2284 true chr3: 39249088-39251371 Medicago truncatula
Medtr3g086590 1.0kb downstream 1.0kb downstream 1000 false chr3: 39250372-39251371 Medicago truncatula
Medtr3g086590 2.0kb upstream 2.0kb upstream 3284 true chr3: 39247088-39250371 Medicago truncatula
Medtr3g086590 2.0kb upstream 2.0kb upstream 2000 false chr3: 39247088-39249087 Medicago truncatula
Medtr3g086590 2.0kb downstream 2.0kb downstream 3284 true chr3: 39249088-39252371 Medicago truncatula
Medtr3g086590 2.0kb downstream 2.0kb downstream 2000 false chr3: 39250372-39252371 Medicago truncatula
Medtr3g086590 5.0kb upstream 5.0kb upstream 6284 true chr3: 39244088-39250371 Medicago truncatula
Medtr3g086590 5.0kb upstream 5.0kb upstream 5000 false chr3: 39244088-39249087 Medicago truncatula
Medtr3g086590 5.0kb downstream 5.0kb downstream 6284 true chr3: 39249088-39255371 Medicago truncatula
Medtr3g086590 5.0kb downstream 5.0kb downstream 5000 false chr3: 39250372-39255371 Medicago truncatula
Medtr3g086590 10.0kb upstream 10.0kb upstream 11284 true chr3: 39239088-39250371 Medicago truncatula
Medtr3g086590 10.0kb upstream 10.0kb upstream 10000 false chr3: 39239088-39249087 Medicago truncatula
Medtr3g086590 10.0kb downstream 10.0kb downstream 11284 true chr3: 39249088-39260371 Medicago truncatula
Medtr3g086590 10.0kb downstream 10.0kb downstream 10000 false chr3: 39250372-39260371 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026610 5273 Angiosperm View MSA
123738907 5271 Pentapetalae View MSA
122311971 5265 Fabidae View MSA
124070856 5270 Rosid View MSA
122794686 5272 Eudicot View MSA
121351730 5274 Embryophyte View MSA
123428426 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.931     High  
cufflinks 1.431       Low
cufflinks 2.294        
cufflinks 427.23     High High
cufflinks 2.832        
cufflinks 237.168     High  
cufflinks 215.073     High  
cufflinks 0.766       Low
cufflinks 161.038     High  

0 Strain